Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0943 ATGCAATTCAACATATCCCTACTTTTTCTTATTCTTTTTGCTTCACCACTATTGTCAGTGCTCTCTGTGGACCCTGCATTCAATGATGATGTGTTGGGTTTGATTGTGTTCAAGGCTGGTTTGGAAGATCCAAAGGGTAAACTCTCTTCATGGAATGAAGATGATTACAGCCCTTGCAAATGGGATGGTGTCAAATGTGACAATCAAACCAATAGGGTCTCTTCCCTTGTCCTTGATGGGTTCTCTCTTTCAGGCCATGTTGATAGGGGCCTCTTGAGGTTGCAGTTCCTTAAGGTCCTCTCACTCTCCAGGAACAACTTCACTGGCACCATAAACCCTGATCTTCCAAAACTTGGGGGCTTGCAAGTTGTTGATTTGAGTGAAAATAATCTCTCTGGATCAATTCCTGAAGGGTTTTTTCAGCAATGTGGCTCTCTAAGGACAGTTTCCTTTGCCAAAAACAGCCTCACAGGTAAGGTTCCTGATTCTTTGAGCTCGTGCTCCACTTTGGCAAATGTTAACTTGTCTTATAATCAAATTAGTGGGGAATTGCCATCTGGGATGTGGTTCTTGAGGGGACTACAGTCACTTGATCTGTCAAATAACTTGCTGGAGGGAGAGATTCCTAAAGGAATCCAGAATCTGTATGATTTGAGGGAGTTGAGTCTGCAGAAGAACCACTTTACTGGCAGGATTCCTGGTGATATTGGAGGCAGCTTGCTCTTGAAATCAATTGATTTGAGTGGTAATTTTCTATCTGGGGAACTTCCTGAGTCAATGCAAAGGCTCACTTCATGTACAGCACTCAGTTTGCAGGGAAATTCATTCACAGGGGGCATTCCTGAGTGGATTGGAGAATTGAAAAATCTGGAGATGTTGGATCTTTCTGCAAATGGATTTTCTGGTTGGATTCCAAAATCATTAGGAAATGTGGACTCACTGCTTAGGTTAAATTTGTCCAGGAATCGGTTCATAGGAAACTTGCCAGATTCAATGGCAAATTGCACTAGGCTTTTGGCTCTTGACACAAGCCACAATCAGTTGTCTGGCCAACTTCCTTGGTGGATATTCATAAAGGGGTTACAAGGTGCATCTTTTAATGCTCTTGAAGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGAGCTTCCATCTGGCATTGGGAGCCTTAGCAGTTTGCAAGTCTTGAATGTGTCCATCAACAATATCTCTGGTCCTATTCCTGTTGGTATCGGTGAACTTAAATCTTTGTACATTCTTGACTTGAGTGGCAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAGGGGGCAACTTCACTCAGTGAACTGAGGCTACAAAAGAATTTCCTTGGTGGGAGTATTCCAGCACAAATTGAGAAGTGTACATTTCTAACATCTTTGATTCTTTCTCACAACAGGCTTAATGGTTCAATCCCAGCATCCATTGCAAGCCTAACCAATCTTCAATGTGTTGATTTGTCATGGAATGAACTCTCTGGAAGCTTACCTAAGGAGCTTACAAGTCTTTCCCACCTTTTCTCTTTCAATGTATCCTCTAACCACCTTGAAGGTGAGCTACCAGTGGGTGGTTTCTTCAACACCATCTCCCCATCATCTGTCTCTGGCAACCCTTTGTTATGTGGTTCTGTTGTCAACCAATCCTGCCCATCAGACCACCCGAAACCTATCGTCTTAAACCCAAATTCTTCCAGTTCCAACTCCAGCATTTCCTCGCAGAATCAGCATCACAAGATCATACTTAGTATCTCAGCCCTTATTGCTATTGGAGCTGCTGCTTTTATTGCCATCGGTGTGGTGGCTATTACTGTCCTAAATATCCATGCGCGCGCTTCCATGGCTAGTTCTGCTGCTCCATTTGTCTTCTCTGCTGGTGAGGACTATAGCGGTTCGCCTGCGAACGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGTTGATGCAGACTTTGCTGATGGAGCACATAATCTTCTTAACAAAGACAGTGAAATTGGCCGTGGTGGATTTGGAGTCGTTTATCGCACTGTCCTTCGAGATGGGCATTCTGTGGCGATCAAGAAGCTTACAGTCTCCAGTTTGATCAAGTCTCAAGAAGACTTTGAGAGGGAAGTGAAAAAGCTTGGGAAGGTTAGGCACCGAAACCTTGTGGCACTTGAAGGTTATTACTGGACTTCATCCTTGCAGCTCCTCATTTATGAGTACCTATCCAAGGGGAGTTTGCATAAGCTCCTACATGATGATAATAGCAAAGATGTCTTCTCTTGGCGACAGAGGTTCAAGATTATTCTCGGCATGGCAAAAGGGTTGGCCCATTTGCACCAAATGAACATAATCCATTATAATCTTAAATCAACCAATGTTCTGATTGATTGTTCTGGTGAGCCAAAAGTAGGAGACTATGGCCTTGTGAAGCTGTTGCCAATTCTAGACCATTGTGTTCTGAGCAGCAAAATTCAAAGTGCACTCGGGTACATGGCTCCTGAGTTCGCTTGCCGCACAGTCAAGATAACCGAGAAATGCGATATATATGGTTTTGGAATCCTGGTTCTGGAGGTGGTGACAGGAAGAAGACCTGTGGAATATATGGAGGATGATGTGGTTGTTCTATGTGACATGGTGAGGGGTGCACTGGAGGAAGGCAAGATGGAGCAATGTGTTGATGGGAGGCTTCTTGGTAATTTCGCTGCAGAAGAAGCAATTCCAGTGATAAAACTGGGGTTAATTTGTGCATCACAAGTGCCATCAAACCGTCCAGATATGGCTGAGGTAGTCAACATATTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATAA 2847 0.4355 MQFNISLLFLILFASPLLSVLSVDPAFNDDVLGLIVFKAGLEDPKGKLSSWNEDDYSPCKWDGVKCDNQTNRVSSLVLDGFSLSGHVDRGLLRLQFLKVLSLSRNNFTGTINPDLPKLGGLQVVDLSENNLSGSIPEGFFQQCGSLRTVSFAKNSLTGKVPDSLSSCSTLANVNLSYNQISGELPSGMWFLRGLQSLDLSNNLLEGEIPKGIQNLYDLRELSLQKNHFTGRIPGDIGGSLLLKSIDLSGNFLSGELPESMQRLTSCTALSLQGNSFTGGIPEWIGELKNLEMLDLSANGFSGWIPKSLGNVDSLLRLNLSRNRFIGNLPDSMANCTRLLALDTSHNQLSGQLPWWIFIKGLQGASFNALEVLDLSSNAFSGELPSGIGSLSSLQVLNVSINNISGPIPVGIGELKSLYILDLSGNKLNGSIPSEIEGATSLSELRLQKNFLGGSIPAQIEKCTFLTSLILSHNRLNGSIPASIASLTNLQCVDLSWNELSGSLPKELTSLSHLFSFNVSSNHLEGELPVGGFFNTISPSSVSGNPLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISSQNQHHKIILSISALIAIGAAAFIAIGVVAITVLNIHARASMASSAAPFVFSAGEDYSGSPANDPNYGKLVMFSVDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQEDFEREVKKLGKVRHRNLVALEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNSKDVFSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKVGDYGLVKLLPILDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYGFGILVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKMEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEELE* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0943 948 Pfam Protein kinase domain 666 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0943 948 PRINTS Leucine-rich repeat signature 194 207 - -
Dod01g0943 948 PRINTS Leucine-rich repeat signature 414 427 - -
Dod01g0943 948 Gene3D Ribonuclease Inhibitor 274 559 IPR032675 -
Dod01g0943 948 Pfam Leucine Rich Repeat 242 262 IPR001611 GO:0005515
Dod01g0943 948 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Dod01g0943 948 Gene3D Transferase(Phosphotransferase) domain 1 742 946 - -
Dod01g0943 948 SUPERFAMILY Protein kinase-like (PK-like) 666 938 IPR011009 -
Dod01g0943 948 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 939 - -
Dod01g0943 948 SUPERFAMILY L domain-like 45 357 - -
Dod01g0943 948 Gene3D Ribonuclease Inhibitor 186 273 IPR032675 -
Dod01g0943 948 ProSiteProfiles Protein kinase domain profile. 665 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0943 948 ProSitePatterns Protein kinases ATP-binding region signature. 671 694 IPR017441 GO:0005524
Dod01g0943 948 SMART LRR_sd22_2 287 313 - -
Dod01g0943 948 SMART LRR_sd22_2 414 437 - -
Dod01g0943 948 SMART LRR_sd22_2 191 217 - -
Dod01g0943 948 SMART LRR_sd22_2 486 512 - -
Dod01g0943 948 CDD STKc_IRAK 671 937 - -
Dod01g0943 948 Gene3D Phosphorylase Kinase; domain 1 642 741 - -
Dod01g0943 948 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Dod01g0943 948 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Dod01g0943 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 939 - -
Dod01g0943 948 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Dod01g0943 948 SMART LRR_typ_2 118 142 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 510 534 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 486 509 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 287 310 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 311 335 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 414 438 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 366 390 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 191 214 IPR003591 -
Dod01g0943 948 SMART LRR_typ_2 215 239 IPR003591 -
Dod01g0943 948 SUPERFAMILY L domain-like 287 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0943 Dod-Chr1 17287127 17290152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0943 6 947 Receptor kinase-like Gene Family AT3G56370 62.526 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dod01g0943 Pkinase 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0943 - - gmx:100790365 1563.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0943 01 17287127 17290152 Dod01g0943 01 17287127 17290152 ECH
Dod01g0943 01 17287127 17290152 Dod07g1688 07 44804951 44809082 PCT