Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0938 ATGGAGAATAATAATAATCATGTTGCTAGAAAGGCAATTGAGGAGCTAGTGAAGGGGCGTGAATTTGCCAACAAGCTTAGGCGAGTGATTAATGGTGGTGGTGGTGGTGTTGGGGATGGGGATGGTGAGCAGCTTGTGAGGAAGGTGCTCATGTCCTTCACCAACTCCCTTTTGATCTTGAACACCCCTTCTTCTGAGTCACATGATGCCCCTTCCACTCGGATCAACCCGACCAAATCTGAGGACTCCTTAGAGAGTAATTGCAAGAGTTCCACAGTTAAGGAGCGAAGAGGGTGTTACAAGAGAAGAAGGACTTCACAATCTTGGGAGAAGGAGTCTGAAGCTCCAATTGATGATGGTCATCAGTGGAGAAAGTATGGCCAAAAAGTCATCCTTAATGCCAAACATCCAAGGAACTACTACAGATGCACTCACAAATTTGATCAAGGTTGCCAAGCAACCAAACAGGTGCAGAGAGTTCAAGATGATCCACCACTCTTCAAGACTACCTACTATGGCCAACACACTTGCAGGAACTTGATGAACCCTGAGATCATAATTGGTTCCACCAATTCCCCAAATTCTAACTCTTCTATGGTCCTTAGCTTTGGCAAACAAGATCACTGCACCCCCTTTCTCACATCTTCTTTCCCACCATCATCAGCAACTACAACATCATCGGCAGTGAAGACTGAGTGCAAGGAGGAGATCATCCCTTCATCTTCTTCCAATGATTACTTGCTCACTTCTGAGCTCACTTTTGATAACTCAAAGCATGTCACTAACGCTCTTTCATCAAACCTTGACTCAGATGATGTTATGTCTGGTGCCTTGTATGATTCTGCTGAGCTTGATGATGCCTTTGAACCCTTTTTTCAATTTTGA 885 0.4452 MENNNNHVARKAIEELVKGREFANKLRRVINGGGGGVGDGDGEQLVRKVLMSFTNSLLILNTPSSESHDAPSTRINPTKSEDSLESNCKSSTVKERRGCYKRRRTSQSWEKESEAPIDDGHQWRKYGQKVILNAKHPRNYYRCTHKFDQGCQATKQVQRVQDDPPLFKTTYYGQHTCRNLMNPEIIIGSTNSPNSNSSMVLSFGKQDHCTPFLTSSFPPSSATTTSSAVKTECKEEIIPSSSSNDYLLTSELTFDNSKHVTNALSSNLDSDDVMSGALYDSAELDDAFEPFFQF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0938 294 MobiDBLite consensus disorder prediction 95 114 - -
Dod01g0938 294 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 262 IPR044810 GO:0003700
Dod01g0938 294 SMART WRKY_cls 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0938 294 MobiDBLite consensus disorder prediction 62 90 - -
Dod01g0938 294 Gene3D WRKY domain 102 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0938 294 Pfam WRKY DNA -binding domain 118 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0938 294 SUPERFAMILY WRKY DNA-binding domain 115 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0938 294 MobiDBLite consensus disorder prediction 62 87 - -
Dod01g0938 294 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 4 262 - -
Dod01g0938 294 ProSiteProfiles WRKY domain profile. 112 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0938 Dod-Chr1 17232418 17234514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0938 11 177 WRKY Transcription Factor Family AT3G56400 42.614 5.65e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g0938 WRKY 6.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0938 - - ahf:112797210 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0938 01 17232418 17234514 Dod01g0938 01 17232418 17234514 ECH
Dod01g0938 01 17232418 17234514 Dod07g2228 07 54047046 54049401 PCT