Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0936 ATGAGTTCTGATCAGCCACTGCATTTGGGATCAGATCTCCTTTCTACAGTGATCCACAGGAAAACGGGATCCAGAAGCCGCACCGTTTCATTCTCTTCTTCCGTATTTGATGATGCTCAATCCCATCTCAGCACTGATTTTGAACGAAGGGAAGAAGACCAACACGCTGTGATAGAGATAGAGATCTTCACTCTAACAAGAAGCACGCCCTTGGAATGCCCCACGAGGGAGAGGGTCAGAAGGGCATCGCGGGCTGCAATGGAACTGCATGATACCATCACCAATAGCAGCAGCAGCATCAGTGTGCCCTTTGAAATCTCAGGTGCTTCATCACAACAGGTTCATCATGATAGGTTGAGTAGTAGTAATCATCATCATAATAATAATGTTAATAGTAAGTCTCAGAGGATTAGGCACAAGAGCGTGCAGTTTGATGATGTCTTGTTGCATGATGATAGTGCTAGGCTGATATATATCAATGATCCTAAGAGGACCAATGATAAGTATGAGTTCACTGGGAATGAGATCAGGACTAGTAAATACACCTTTATTACCTTCCTCCCCAAGAACCTCTTCATTCAGTTTCATAGGGTTGCTTATTTATATTTCCTTGCTATTGCGGCTCTCAATCAGCTCCCTCCATTGGCTGTGTTTGGGAGGACTGTGTCCCTTTTCCCACTTTTGTTTGTGCTTTGTGTTACGGCCATTAAGGATGGATATGAGGATTGGCGGCGGCACCGGTCCGACCGCAATGAGAACAATCGGGAGTCTCTGGTGCTTCAATTCAGCGATTTCCGGTCGAAGAAGTGGAAGCATATACAAGCGGGTGAGGTTGTTAAGATCTTTGCAGATGAGACAATTCCGGCTGACATGGTCTTGTTGGGTACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGGGAGTCGAATTTGAAGACAAGGTATGCTAAGCAGGAAACGGCTTCGGCAGTTTCTTCAGAAGCTTGTGCTGTTTCTGGGGTTATCAGATGTGAGCAGCCTAATAGGAATATTTATGAGTTCACAGCGAACATGGAGTTCAATGGACTAAAGTTTTCCCTCAGCCAGTCGAACATCGTACTGCGTGGTTGCCAACTAAAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGCGCAGCTTCTCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTAGTTGTGGCGCTTGGGATGGGTCTTTGGCTGGTACGCCACAAGAACCAGCTTGATTCCTTGCCTTACTATAGAAAAAGATACTTCAACAATGGGCCAGATAATGGAAAGAAATACAGGTATTATGGGATACCAATGGAGGCATTTTTCTCCTTCTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAATTGGTTCGCTTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGCTAGCTCTGGATCAAGGTTTCAGTGTAGATCGTTAAATATAAATGAAGATTTGGGTCAAATACGTTATGTATTTTCAGACAAGACAGGAACACTGACAGAAAACAAAATGGAGTTTCGGAGGGCTAGTGTAAATGGGAAGAATTATGGGAACTCCTTGGTCACGGCTGATAATGATACAGCAGCTGCAGCTGTTATTCCTAAGCGGAGATGGAAGCTCAAATCTGAAATTCCAGTTGATTCTGAACTGTTGACTGTGTTGCGGACAGAATCAAATAGAGATGACAGAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATCCCTATACTTACTGGTTGTATATTTCCCAGTAGTGGAACAAGTGAATCAAATGAAGATATAGAAGGCATTGATTATCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGACACATTGTTATTGACGTCATTGGTGAGAAGCTCAGATTGGACGTATTGGGCCTACATGAGTTTGATAGTGTGCGGAAGAGGATGTCTGTTGTCATTCGGTTTCCTGACAATGTTGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGTATTTTAGAAAATGACAGTGAGAGCAACGATAGCATGCAGCATGCAACTCAGAGTCATTTGAATGAATATTCTTCACTAGGTTTGCGCACTCTTGTAGTTGCCTCCAGGGATCTTTCGGATGCTGAACTTGAGGAGTGGCAAAGCATGTATGAAGAGGCCAGCACATCGTTGTCTGATAGGGCTGCTAAGCTTCGTCATACTGCAGCTCTTATAGAGTGCAACTTAAAGCTCCTTGGTACAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTTCCAGAAGCCATTGAGTCTCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACGGCGATTTCAATTGGTCTTTCCTGCAAACTTCTGACTGCAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGGTTGAATGCCGAAATCTTTTGGGCGATGCTAAAGCTAAATATGGTGTGAGATCTTCAAGTAGAGGGCAACAAAATCCAAATCACAAAACCAATGCTGGATTTGGTGATCTTGATATTCTCAATGGATCAAAATCATTGAGTTTGCCCAAGTGGAATTCCAGGAAAGGAAGAAGGAACTACTGCTCCATTGGCGCTCATAATTGA 2832 0.4287 MSSDQPLHLGSDLLSTVIHRKTGSRSRTVSFSSSVFDDAQSHLSTDFERREEDQHAVIEIEIFTLTRSTPLECPTRERVRRASRAAMELHDTITNSSSSISVPFEISGASSQQVHHDRLSSSNHHHNNNVNSKSQRIRHKSVQFDDVLLHDDSARLIYINDPKRTNDKYEFTGNEIRTSKYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQFSDFRSKKWKHIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETASAVSSEACAVSGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETLWLSIFLFIMCLVVALGMGLWLVRHKNQLDSLPYYRKRYFNNGPDNGKKYRYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVNGKNYGNSLVTADNDTAAAAVIPKRRWKLKSEIPVDSELLTVLRTESNRDDRIAAHEFFLTLAACNTVIPILTGCIFPSSGTSESNEDIEGIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVIGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILENDSESNDSMQHATQSHLNEYSSLGLRTLVVASRDLSDAELEEWQSMYEEASTSLSDRAAKLRHTAALIECNLKLLGTTGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEVECRNLLGDAKAKYGVRSSSRGQQNPNHKTNAGFGDLDILNGSKSLSLPKWNSRKGRRNYCSIGAHN* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0936 943 MobiDBLite consensus disorder prediction 893 907 - -
Dod01g0936 943 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 142 913 - -
Dod01g0936 943 Gene3D - 230 400 - -
Dod01g0936 943 Pfam Phospholipid-translocating ATPase N-terminal 157 222 IPR032631 -
Dod01g0936 943 MobiDBLite consensus disorder prediction 891 912 - -
Dod01g0936 943 Pfam E1-E2 ATPase 267 502 - -
Dod01g0936 943 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 550 827 IPR023299 GO:0000166
Dod01g0936 943 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 477 567 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0936 943 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 142 913 - -
Dod01g0936 943 SUPERFAMILY Calcium ATPase, transduction domain A 257 396 IPR008250 -
Dod01g0936 943 MobiDBLite consensus disorder prediction 113 136 - -
Dod01g0936 943 Pfam Cation transport ATPase (P-type) 648 735 - -
Dod01g0936 943 SUPERFAMILY Calcium ATPase, transmembrane domain M 171 538 IPR023298 -
Dod01g0936 943 Gene3D - 542 817 IPR023299 GO:0000166
Dod01g0936 943 SUPERFAMILY HAD-like 531 863 IPR036412 -
Dod01g0936 943 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 171 895 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod01g0936 943 ProSitePatterns E1-E2 ATPases phosphorylation site. 546 552 IPR018303 -
Dod01g0936 943 Gene3D - 818 912 IPR023214 -
Dod01g0936 943 CDD P-type_ATPase_APLT_Dnf-like 173 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0936 Dod-Chr1 17219277 17222954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0936 115 888 Primary Pumps ATPases AT5G04930 56.764 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0936 K14802 - gmx:100812459 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0936 01 17219277 17222954 Dod01g0936 01 17219277 17222954 ECH
Dod01g0936 01 17219277 17222954 Dod07g2229 07 54061730 54066756 PCT