Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0931 ATGGTTTCCTCTCAGCTTTCTGGTTTGACTACGGCTGGCATATTTACACCGTTACAGACTCAGCTACTCTTTCCTGAAAGCCTTCCTGGTAGTGTAAACACAGATCACATTGAGCTAGATTTCTCTGATGTCTTTGGTCCAGTTACACTTCCAACTTCAGTAGATGTTGATTCTGCTGCTGCGGAGTCTCTTGATGAATTTAGCGAGCTGGTTTACGATGAACCCGAAGTCATTTTCACCCGCTCGCATTCCTTGGTTGGTCCTTCTGCTTGTGTAAGTCAATCACTGAAGTTCGGAAAACTCACCATTCACGAGAGTGAGGATTTGTTGGAACTTGAGGAGCGTGTCACTGGAGAGACCATTAAAGACGTCGAAGAACCTTCCATTGACAATGTTATCCCTGAGGAAGATGAAGATGGGAATCTCTTGAGGATCCTGAGAGTTAGCCTTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAGGGCGCATTTGCAAAAGTATATCAAGTGAAGAAAAAGGGTACTTCAGAAATATATGCTATGAAGGTTATGAGGAAGGACAAAATTGTGGAGAAGAACCACGCTGAATACATGAAAGCTGAGAGGGATATCTTGACAAAAATAGAGCACCCCTTTGTTGTACAGCTCAGATACTCTTTTCAGACAAAATACAGATTGTACCTTGTGCTGGATTTTGTGAATGGCGGCCATCTTTTCTTTCAGTTGTATCACCAGGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGAGATTGTTTCTGCAGTTTCACATCTCCATTCACAAGGAGTAATGCATAGGGATCTAAAACCTGAAAATATCCTGCTGGATGCTGATGGTCATGTTATGTTGACTGATTTTGGCCTAGCTAAGCAAGTCGAAGAGAGTACAAGGTCTAATTCTATGTGTGGAACTTTGGAGTACATGGCACCTGAAATTATTCTAGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTGGGCATCCTGCTGTTTGAGATGCTTACTGGAAAGCCACCCTTCTGTGGTGGGAACCGTGAGAAAATTCAGCAGAAGATAGTGAAAGACAAGATTAAGCTGCCTGCATTTTTGTCTAGTGAAGCGCATTCTCTGTTGAAAGGGCTGCTACAGAAGGAGGCAGCTAAGCGCTTAGGTAGTGGACCTAAGGGGATTCATGAGATCAAAGGCCACAAGTGGTTCAAACCAATCAATTGGAAGAAGCTGGAAGCACGAGAAATCCAACCAAGCTTTAGGCCTGAAGTGGCTGGGAAGCACTGTGTCGCCAACTTTGAGAAGCGCTGGACTGATATGCCTGTTGTCGACTCGCCAGCCGGCAGCCCCAATGGCGGAAACCCCTTCAAGGGCTTCTCTTATGTGAAGCCTGCAGCCTCTTTTCTTCAAAGGAACAGCCCTGCTTGCTAA 1449 0.4527 MVSSQLSGLTTAGIFTPLQTQLLFPESLPGSVNTDHIELDFSDVFGPVTLPTSVDVDSAAAESLDEFSELVYDEPEVIFTRSHSLVGPSACVSQSLKFGKLTIHESEDLLELEERVTGETIKDVEEPSIDNVIPEEDEDGNLLRILRVSLEDFEILKVVGQGAFAKVYQVKKKGTSEIYAMKVMRKDKIVEKNHAEYMKAERDILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHSQGVMHRDLKPENILLDADGHVMLTDFGLAKQVEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNREKIQQKIVKDKIKLPAFLSSEAHSLLKGLLQKEAAKRLGSGPKGIHEIKGHKWFKPINWKKLEAREIQPSFRPEVAGKHCVANFEKRWTDMPVVDSPAGSPNGGNPFKGFSYVKPAASFLQRNSPAC* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0931 482 SMART pkinase_C_6 410 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod01g0931 482 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod01g0931 482 Gene3D Phosphorylase Kinase; domain 1 150 450 - -
Dod01g0931 482 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 480 - -
Dod01g0931 482 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 480 - -
Dod01g0931 482 SMART serkin_6 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0931 482 CDD STKc_AGC 159 409 IPR045270 GO:0004674|GO:0005524
Dod01g0931 482 SUPERFAMILY Protein kinase-like (PK-like) 150 461 IPR011009 -
Dod01g0931 482 Gene3D Transferase(Phosphotransferase) domain 1 233 428 - -
Dod01g0931 482 Pfam Protein kinase C terminal domain 431 467 IPR017892 GO:0004674|GO:0005524|GO:0006468
Dod01g0931 482 ProSiteProfiles Protein kinase domain profile. 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0931 482 Pfam Protein kinase domain 153 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0931 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Dod01g0931 482 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0931 Dod-Chr1 17173299 17176445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0931 1 479 AGC Kinase Gene Family AT3G08720 68.257 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Dod01g0931 Pkinase 5.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0931 K04688 - gmx:100804819 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0931 01 17173299 17176445 Dod01g0931 01 17173299 17176445 ECH