Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0928 ATGAAAATCAACGACACCAATTCAACGAAAAGTGCGACCAGGCGCTTAAAACAAGTGCTTGATGAGCTAGCATGCGAAGAAGATGATATTATGGGACAAGTAAAACTGCTAGAGTCTCGGGGCAAGAAGCGCAATAGACAAGTTGATGATTGGTTGAACAAAGTACAAGAACTGAAAAGGAAAGCAGGTCATATGAATTACACAGTTGATCAGTTTGGCTGCATCCACGGACCAGATATACTGCAATTGGCTGAAGATATGAGAAGCCATCAGAATGGAAAGCCTTTGGTGTTGTCCAATGAATTTGTTGGTGAGAATTTTGAGAAAAATGTTAAGAAGATGTGGAAACTTCTCGAGGATGACCAAGTATTCATCATTGGCATATGTGGAATGGGAGGGGTGGGAAAAACATGCCTAATAACTTACTTGGCGAATGAAGTAAAAAGGAAGGGAAGTTTTGACCATGTCTTTGGTGTCACCGTTTCCCATGAATTTAGCATTTCAAGATTGCAGCATGACATTGCGGAGCAAATAGGTGCAAAGCTTGATGGAAATAATGAGGGAAAAAGAGCACTAAGTTTGTCATCGGCATTGGAGGCAAAGGGAAAATCGGTACTTATTTTGGATGATGTATGGAAAAATATTGATCTTCAAAAAGTGGGAATTCCACTTAATGTGAATGGCATTAAATTGATTCTAACAAGTCGATTGAAACATGTGTGTCAAGAGATGAATTGTCCACCAAAGAGTATAGTAGAAGTGCGTCCTCTCTCTCGTGAAGAAGGTAGGGAGTTATTTTTGTTAAAACTTGGGCACAACGGAACACCTGCAACACTTCCACCTGAAGTAATAGAGATTGCAAGATCTATTGCAATGAAATGTGACGGTCTACCACTTGGAATCAGTGTGATGGCTAGGACTATGAAAGGGTTAAATCACATTCATTGGTGGAGACATGCATGGAATAAACTTCAAAGTTTGGAAATGGGAGAAGAGATGGAAGAGGAGGTTTTGAAAGTATTAAAACGCAGTTATGATAACTTGGTGGATAAGAACTTGCAAAACTGTTTCTTACACTGTGCATTGTATTCTAAAATTGAAAGATCCGATTTAATTATGAAGTTTGTGGACAACAAACTGATAAATGGAATGAGAACCTTGCAAGAAATATTTGATGAGGGGCGTATCATCGTGGATAAACTCAAAGACCATTCTCTGTTGATCAGTGATAATCCTTTTCAGATGCATGGTCTGGTGAGGAACATGGCGTGTCGAGTGATAAAAGAGAACCACAAGTACATGGTGAAATGTAATGAAGAATTGACAGAGATGCATTACTTGCAAGAATGGACAACTGATTTGGAGGTGGTTTCTTTAATGTGGAACAAGACATACGAAATCCCAGCAGGTGCATCACCTCGCTGTCCTCGGCTGTCCACCTTGATTTTAAGTCATAAACGCCTCCAGTGCATCCCAGAGTGCTTTTTAACACACATGAATGCTCTAGCCGTACTTGATTTATCCTTTACTGAGACACTAACATATTTGCCGGATTCACTGTCTGAATTGAGGTCTCTCATTTCTTTAGTGCTCAAAGGTTGTTGTAAACTCAAACATGTGCCTCCATTGGGAGAGCTCAAAGCCCTATCAAGATTGGACCTTTCACACACTTCAATTGAGGAAGTTACGGGCTTGGAAGAGCTAATTAACTTGAAATGGCTTGATTTGTCTTTTAGTCATTTGAATTTAGTACCAGGGTCTGTGCTCCCTGGTTTGACCAATATGCAGTTCCTTGATCTCCGTGTTTTTTTTGCTTCAATAGAAGTGAAAGAAAATGATTTAGAGACAATGAGTATCCTAGAATGTTTTGCAGGTAGCTTTGAACACTGCCAGAACTACAACAACTTTGTGCGAAACAATGAAGTCAACGGTTTTGGGCCAAAAAGTTACCATCTCCATTCAGGAACTTGGCCTGAAACGGATGCTTTTGAGGATCTTGTTACTGATGGAGCTTTAATTTTTCCCGATAATGTTAAGTCCCGAATTGTATCCTTTGGAGATTGCAATGATGATCTCACCCATTTGCTGCCAAGAGACCTTGCAGGACTGTGTATATATCAGAATGATCATTGGACATGCTTGTGTGAGGCTCTCTCCTCTAATATTGGTCCTACTTCTCTGGGGGGAATTGCTATTTCTTGTTGCACAAAACTGGAGAGCTTGTTTTGTTCAGTTTATTCTTGTTCCCTATGCACTAATATCCCAGAACTTGAAGTTTGTTTCCTTGAGGATTTGGAAAGCTTAACTGTGATTTGTAAGGAAGATGATGCCAGTACGGCACCATCTTTGCCGTCACCGAGTGGTGTGTTCTCCCGTCTCAGCGAATTGTGTATCTCGGATTGCCATGCGATAGAGAAGTTGCTGACACCGGGGTTACTGCCACAGCTTCAAAATCTCGAGAAACTAGAGGTAATACGCTGTAAGTCAGTGAAGGAGATATTTGCACTGAGTAACAGTGGTGATGATGATGATGCTTCCATCGCACTCCCGCAGTTAACCAGATTGACGTTGGAAAATTTACCAGAGTTGAAAATCGTGTGCAAGGCAACTATAGTCTTTGGATCTGTGCCAGCAATTGACATCAGTGGCTGTCCCAAGTTAGAGAGGTTCCCTATAACTATTACACAAGCCGTTGATTTTGATTCTTCTGATTCTGATTGA 2721 0.4076 MKINDTNSTKSATRRLKQVLDELACEEDDIMGQVKLLESRGKKRNRQVDDWLNKVQELKRKAGHMNYTVDQFGCIHGPDILQLAEDMRSHQNGKPLVLSNEFVGENFEKNVKKMWKLLEDDQVFIIGICGMGGVGKTCLITYLANEVKRKGSFDHVFGVTVSHEFSISRLQHDIAEQIGAKLDGNNEGKRALSLSSALEAKGKSVLILDDVWKNIDLQKVGIPLNVNGIKLILTSRLKHVCQEMNCPPKSIVEVRPLSREEGRELFLLKLGHNGTPATLPPEVIEIARSIAMKCDGLPLGISVMARTMKGLNHIHWWRHAWNKLQSLEMGEEMEEEVLKVLKRSYDNLVDKNLQNCFLHCALYSKIERSDLIMKFVDNKLINGMRTLQEIFDEGRIIVDKLKDHSLLISDNPFQMHGLVRNMACRVIKENHKYMVKCNEELTEMHYLQEWTTDLEVVSLMWNKTYEIPAGASPRCPRLSTLILSHKRLQCIPECFLTHMNALAVLDLSFTETLTYLPDSLSELRSLISLVLKGCCKLKHVPPLGELKALSRLDLSHTSIEEVTGLEELINLKWLDLSFSHLNLVPGSVLPGLTNMQFLDLRVFFASIEVKENDLETMSILECFAGSFEHCQNYNNFVRNNEVNGFGPKSYHLHSGTWPETDAFEDLVTDGALIFPDNVKSRIVSFGDCNDDLTHLLPRDLAGLCIYQNDHWTCLCEALSSNIGPTSLGGIAISCCTKLESLFCSVYSCSLCTNIPELEVCFLEDLESLTVICKEDDASTAPSLPSPSGVFSRLSELCISDCHAIEKLLTPGLLPQLQNLEKLEVIRCKSVKEIFALSNSGDDDDASIALPQLTRLTLENLPELKIVCKATIVFGSVPAIDISGCPKLERFPITITQAVDFDSSDSD* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0928 906 Gene3D - 257 349 IPR042197 -
Dod01g0928 906 Pfam NB-ARC domain 108 347 IPR002182 GO:0043531
Dod01g0928 906 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Dod01g0928 906 PRINTS Disease resistance protein signature 198 212 - -
Dod01g0928 906 PRINTS Disease resistance protein signature 125 140 - -
Dod01g0928 906 PRINTS Disease resistance protein signature 497 513 - -
Dod01g0928 906 PRINTS Disease resistance protein signature 294 308 - -
Dod01g0928 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 360 IPR027417 -
Dod01g0928 906 Gene3D - 88 252 IPR027417 -
Dod01g0928 906 Gene3D Ribonuclease Inhibitor 698 901 IPR032675 -
Dod01g0928 906 PANTHER - 42 870 - -
Dod01g0928 906 SUPERFAMILY L domain-like 414 891 - -
Dod01g0928 906 PANTHER DISEASE RESISTANCE PROTEIN RP 42 870 IPR044974 GO:0006952
Dod01g0928 906 Gene3D Ribonuclease Inhibitor 442 654 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0928 Dod-Chr1 17132759 17135479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0928 126 427 WRKY Transcription Factor Family AT5G45050 24.510 4.57e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0928 - - gsj:114397439 864.374