Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0912 ATGCCGAGGATGAAGATATATGGGTATGCTTTGGTTGTTTCAGCTTGTTATCTCATTTCCATAGCAGCTGCACAGAGCACAGCTCCCTCAGAAGTGAATGCACTGTCACAAATCAAGAAAAGTTTGATTGATCCCATGAACCATTTGTGGAACTGGAATAAGGGTGACCCATGTGGATTAAACTGGATTGGGGTCTCATGTTTTCCAACTGTTGGTGCTGATGGTTACTTCCATGTCCAAGAGCTCCAACTCGATAACAATAACTTCAGAGGGATTGGAGTTCCTGCTTCCTATGCAAACTTATCTAGACTGGCAAAATTATGCTGGTTTATGAATTTATGCCTAATGGAACCTTGCGGGACTGGCTTTCAGGGTTACTTGGATCCAGAGTACTTATTGACTCACAAATTAACAGATAAGAGTGATGTCTATAGTCTTGGAGTTGTGTTTTTGGAGCTTTTGACCGGCATGCCACCGATAACACGCGGAAAAAACATTGTTCGTGAGATATTCACCGTCGATAACAGTGACTAA 534 0.4232 MPRMKIYGYALVVSACYLISIAAAQSTAPSEVNALSQIKKSLIDPMNHLWNWNKGDPCGLNWIGVSCFPTVGADGYFHVQELQLDNNNFRGIGVPASYANLSRLAKLCWFMNLCLMEPCGTGFQGYLDPEYLLTHKLTDKSDVYSLGVVFLELLTGMPPITRGKNIVREIFTVDNSD* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0912 177 SUPERFAMILY Protein kinase-like (PK-like) 118 169 IPR011009 -
Dod01g0912 177 Gene3D Transferase(Phosphotransferase) domain 1 116 176 - -
Dod01g0912 177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 121 176 - -
Dod01g0912 177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 112 - -
Dod01g0912 177 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 112 - -
Dod01g0912 177 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 121 176 - -
Dod01g0912 177 SUPERFAMILY L domain-like 27 107 - -
Dod01g0912 177 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Dod01g0912 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0912 177 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Dod01g0912 177 Gene3D Ribonuclease Inhibitor 28 115 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0912 Dod-Chr1 16923780 16937733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0912 122 177 Receptor kinase-like Gene Family AT5G01950 75.000 2.29e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod01g0912 LRRNT_2 4.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0912 - - rcu:8267971 119.398