Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0886 ATGGGCAACTGCGGCACCAGAGAGGAATCTGCAGTAATTTCCAATGCTCAAGTTCAGCAGCTTCAAGCGCCATCGTTGACCTCCAGAAACGGCAGCGAGAGGAAGCACAGCAGGTCGGTGTCGGATCTGAGCGAGTCATGCTCGACGCCGCGGCACTACAACTTGGAAGACGTACGGAACAACACGCTCTTGTACACTCACGTGATCGCATTCACACTTTATGAGCTCGAGACTATTACGAAGAGCTTCCGCTCCGATTACATTCTCGGCGAAGGAGGGTTCGGGACTGTGTATAAAGGGTACATTGATGAGAATGTGAGGGTTGGGCTCAAGTCTCTGCCTGTTGCGGTTAAGGTTTTGAACAAGGAGGGGCTTCAGGGACACCGAGAATGGCTTACAGAAGTGAATTTTCTGGGGCAGCTTAGGCATCCTAATCTGGTGAAGTTGATAGGGTACTGTTGTGAGGATGACCACAGGCTGCTTGTGTACGAGTTCATGTTTCGAGGAAGCTTGGAAAATCACCTATTCCGAAGGGCTACTATCCCTTTATCATGGGCCACAAGAATGATGATTGCTCTTGGAGCAGCCAAAGGGCTTGCCTTTCTACACAATGCTGAAAGGCCAGTAATCTATCGTGACTTCAAAACGTCTAATATATTATTGGACTCTGACTATACGGCCAAGCTGTCTGATTTCGGACTAGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCCACCCGAGTCATGGGTACATATGGTTATGCCGCCCCTGAATATGTAATGACTGGCCACCTGACAGCTAGGAGCGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAGCTTTTAACAGGAAGGAAATCTGTTGACAAGACAAGACCCGGGAGGGAACAGAGCTTAGTAGATTGGGCACGGCCAAAGCTTAACGACAAGAGAAAGCTCCTACAAATAATTGATCCTAGATTGGAGAACCAGTACTCAGTGAGGGGAGCACAGAAAGCATGCAGCTTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCCAGGCCACTAATGAGTGATGTGGTTGAGACATTGGAACCCTTACAAAGTTCTAGTGTTGGTGCAGGTGAAGTCTCATTATCCGGATCAAATAGTGGAAGTGTCGGGCCCTTCACTATGAGCAAAATCTCTGCCTACCGGATGGGTCCCAAGTTTGCAAACAATGTTGGTCCTGGTGCTGCTTGCCGGTCTCCTAACCCAAATTGCTCGCCGGGTGCTCCTGCGTGCCGGGTAAGATGA 1284 0.4891 MGNCGTREESAVISNAQVQQLQAPSLTSRNGSERKHSRSVSDLSESCSTPRHYNLEDVRNNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRRATIPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGREQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRGAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGAGEVSLSGSNSGSVGPFTMSKISAYRMGPKFANNVGPGAACRSPNPNCSPGAPACRVR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0886 427 CDD STKc_IRAK 89 363 - -
Dod01g0886 427 Gene3D Transferase(Phosphotransferase) domain 1 166 373 - -
Dod01g0886 427 MobiDBLite consensus disorder prediction 18 48 - -
Dod01g0886 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Dod01g0886 427 Gene3D Phosphorylase Kinase; domain 1 44 165 - -
Dod01g0886 427 PANTHER OS01G0588500 PROTEIN-RELATED 24 415 - -
Dod01g0886 427 ProSitePatterns Protein kinases ATP-binding region signature. 89 118 IPR017441 GO:0005524
Dod01g0886 427 Pfam Protein tyrosine and serine/threonine kinase 88 360 IPR001245 GO:0004672|GO:0006468
Dod01g0886 427 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0886 427 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 24 415 - -
Dod01g0886 427 SUPERFAMILY Protein kinase-like (PK-like) 60 361 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0886 Dod-Chr1 16252323 16257823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0886 29 370 Glycoside Hydrolase AT3G07070 49.857 6.46e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod01g0886 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0886 - - gmx:102662348 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0886 01 16252323 16257823 Dod01g0886 01 16252323 16257823 ECH