Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0846 ATGTCCATCCTGGCTCAATTTAATACATTCTCCGGGGAACCTTTCGGTGACCTTCGTGTTCAACATTTCACTCGTCATATTCTCTCTGGATTGGCTTACTTGCATGGCAACAACATAGTTCATAGGAACATTAGAGGCGCAAGCTTGCTTGTTGATGAAGCTGGGCTTGTCAAGCTTGCTGATTTTGGGATTGCGAGGCATCTTACTGGACCAGTAACTAATCTCCCTGTGAGGATAAACGCATGCTGGATGGCTCCAGAGCTTATAAAAGGATCAGGGCAAAATGATGAAACCACTTATCCATATGCTGCTGATGTCTGGAGTTTGGGTTGTACAATCATTGAAATGCTCACAGGGATGCCTCCCTGGAGTGAGTATGAAAGAGTAAGCACCTTAGAAACTTATTTTTTTTCCTATCTTTTTTCATTCAAGTTGGATGAAGTGCTTACTAGGAGGCTAAAAGCTACACTGCTACAGCTGATAGTAAGGGTGGAACTTGATTTTCTTGAAATTTCTTAG 519 0.4239 MSILAQFNTFSGEPFGDLRVQHFTRHILSGLAYLHGNNIVHRNIRGASLLVDEAGLVKLADFGIARHLTGPVTNLPVRINACWMAPELIKGSGQNDETTYPYAADVWSLGCTIIEMLTGMPPWSEYERVSTLETYFFSYLFSFKLDEVLTRRLKATLLQLIVRVELDFLEIS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0846 172 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 20 131 - -
Dod01g0846 172 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 20 131 - -
Dod01g0846 172 Pfam Protein kinase domain 15 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0846 172 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0846 172 SMART serkin_6 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0846 172 SUPERFAMILY Protein kinase-like (PK-like) 12 161 IPR011009 -
Dod01g0846 172 Gene3D Transferase(Phosphotransferase) domain 1 3 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0846 Dod-Chr1 15327051 15330061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0846 20 132 MAP Kinase Kinase Kinase AT5G66850 57.895 3.92e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod01g0846 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0846 - - gmx:100793654 146.362