Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0843 ATGGACGAGGTAAGGTTAAGTCCGAGGAATAAGGATGTTCACTCTCTTTTACGAACCGTTGTGCAAGGCCAAGATCTCAATATTAACAAAATCATTGAACGATACCAAAGGAGTGTTCTTGCTGTAAAACATGAGGATGTTGATAGTGAAACTCAGAGGTGGTACCAAGAGGTGTCAAGGCTAAAGGCAAAGTATGAATCTCTTCAAACGACACAAAGGCATTTGCTTGGCGAAGATCTTGGACCACTGAACATAAAAGAGCTACAAAGTCTTGAGAATCAGCTTGAAGGAGCTTTAGCACAAGCAAGGCACAGGAAGGAACGCCACCTTGGAGAAGTGAATAAGCAACTTAGACTCCAGCTTGAAGCATATGGATTTAATCTCAAAGCTATTGAAAGCCTGAGCAGCTCTACCTCTGTTGCTGTTGGAAGTGGCAGCTTTCCCTTCCAGCTTTCTCATCAAGCCGATCCTATGGACTTACAAATAGGGTACCACCATGACTACGTTCCAGGTGAGGCATCAAATGTTCCAAAGAGCGTGGCTAGTGAGACTAACTTCTTCCAGGGATGGGTCCTTTGA 579 0.4421 MDEVRLSPRNKDVHSLLRTVVQGQDLNINKIIERYQRSVLAVKHEDVDSETQRWYQEVSRLKAKYESLQTTQRHLLGEDLGPLNIKELQSLENQLEGALAQARHRKERHLGEVNKQLRLQLEAYGFNLKAIESLSSSTSVAVGSGSFPFQLSHQADPMDLQIGYHHDYVPGEASNVPKSVASETNFFQGWVL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0843 192 Coils Coil 85 108 - -
Dod01g0843 192 Gene3D - 17 161 - -
Dod01g0843 192 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1 27 190 - -
Dod01g0843 192 Pfam K-box region 48 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dod01g0843 192 ProSiteProfiles K-box domain profile. 51 137 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dod01g0843 192 PANTHER SERUM RESPONSE FACTOR HOMOLOG 27 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0843 Dod-Chr1 15294234 15298285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0843 26 192 MADS-box Gene Family AT2G45650 43.299 1.48e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0843 K09264 - gmx:100820061 207.994