Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0838 ATGTTTGTGTGTCACAAACCCAGCATGTCACTGCTTAATATGTTTCTACAGAAACTAACCAAATCCTCTTATCTTCTTTGGCTTCAATTGCTGCTGATCCTGCTGAGCTGTGCCTCAGTTAAAGGAGTCGTGAAAAAGGACTTTTACATTGTTTTCTTGGGACCTCATCCTGTGAGCACAGACATTGCACTTGATACCCATTTGAATGTTTTATCTTCTGTGAAGGGAAGCTACATTGAAGCCCAAGAATCCATGGTGTATAGCTACACCAAAAGCTTCAATGCATTTGCTGCTAAACTATCAGAGGATGAAGCCAGTGAGTTATCTGCAATGGATGATGTACTGCTGGTAATTCAAAATCAGTACCGCAAGCTACACACAACAAGATCATGGAACTTCATTGGTTTACCTCCGAAAGCTAAGAGAAGACTGAAATTTGAGAGTGACATAGTTATTGGTGTTTTGGATACAGGGATCACTCCTGAGTCTAAAAGCTTCAAGGATGATGGGTTAGGTCCTCCACCAGCTAGATGGAAAGGAACTTGTCGCCACTATGCTAATTTCTCAGGCTGCAATAACAAGATCATAGGAGCCAAATACCTCAAAGCTGATGGAATCTCTGATCCCTCTGACATATTATCTCCTATAGATGTTGATGGCCATGGCACTCACACTGCATCAACAGCTGCAGGCAACCTGGTCCCAAATGCAAACCTCTTTGGTTTGGCCAATGGCACTGCTCGCGGTGCAGTGCCATCGGCCAGGCTGGCAGCTTACAAGGTCTGCTGGACATCCAGTGGATGTGCAGACATGGACATACTTGCTGGATTTGATGCTGCTATACATGACGGTGTGGATGTCATATCCATTTCCATAGGTGGGGGGTCTGATTACTATGTGGTTGATTCTATATCAATTGGTGCATTCTTTGCCATGAGGAAAGGTATAATCACAGTTGCCTCAGCTGGAAATGATGGCCCAACTATGGCAACTGTGACAAATACTGCACCATGGATTGTTACTGTAGCAGCTAGTGGCATTGACAGGGCTTTCAAGAGCACTGTACGGCTGGGGAGTGGAAAGAATGTTTCTGGGGTAGGAATAAGTAGTTTCAATCCAAAGCAAAAACAGTACCCTCTTATCAATGGTGTTGATGCATTCCGGGACCCAGAATTCAAGGAAAATGCTAGATACTGCTTTGAAGATTCCTTGGAGCCTAAGAAGGTGAAGGGCAAGCTTGTTTATTGCAAGTTAGGAACATGGGGCACTGAAGCCGTTGTGAAAGGAATTGGAGGCATAGGAACTATAATTGAAAGTGAACAAAATCCTGATGTTGCCCAAATTTTCATGGCTCCTGCTACCATTGTGAATTATAGCTTAGGTGAAGGCATTACCAATTATATACACTCCACAAGATCACCATCGGCAGTGATATACAAGACACATGAAGTCAGAAAGTCAGCACCATTTGCTGCTACATTCACATCTAGAGGTCCAAATCCAGGATCCCGACATGTTCTCAAGCCTGATATTTCAGCTCCTGGCATTGACATATTGGCATCTTATACACTTAGGAAGTCACTCACTGGTTTGAAAGGGGACACCCAATTTTCAGAATTTACGCTAATGTCTGGTACCTCCATGTCATGTCCTCATGTTGCTGGAGCAGCAGCATATGTGAAGTCATTTCACCCAGATTGGACTCCTGCTGCAATCAAATCTGCTATAATTACCACAGCCAAACCAATGAGCAGGAGACTTAACAACTGA 1770 0.4379 MFVCHKPSMSLLNMFLQKLTKSSYLLWLQLLLILLSCASVKGVVKKDFYIVFLGPHPVSTDIALDTHLNVLSSVKGSYIEAQESMVYSYTKSFNAFAAKLSEDEASELSAMDDVLLVIQNQYRKLHTTRSWNFIGLPPKAKRRLKFESDIVIGVLDTGITPESKSFKDDGLGPPPARWKGTCRHYANFSGCNNKIIGAKYLKADGISDPSDILSPIDVDGHGTHTASTAAGNLVPNANLFGLANGTARGAVPSARLAAYKVCWTSSGCADMDILAGFDAAIHDGVDVISISIGGGSDYYVVDSISIGAFFAMRKGIITVASAGNDGPTMATVTNTAPWIVTVAASGIDRAFKSTVRLGSGKNVSGVGISSFNPKQKQYPLINGVDAFRDPEFKENARYCFEDSLEPKKVKGKLVYCKLGTWGTEAVVKGIGGIGTIIESEQNPDVAQIFMAPATIVNYSLGEGITNYIHSTRSPSAVIYKTHEVRKSAPFAATFTSRGPNPGSRHVLKPDISAPGIDILASYTLRKSLTGLKGDTQFSEFTLMSGTSMSCPHVAGAAAYVKSFHPDWTPAAIKSAIITTAKPMSRRLNN* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0838 589 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 582 IPR045051 -
Dod01g0838 589 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 48 582 - -
Dod01g0838 589 Gene3D - 348 484 - -
Dod01g0838 589 ProSiteProfiles Serine proteases, subtilase domain profile. 130 589 - -
Dod01g0838 589 SUPERFAMILY Subtilisin-like 125 585 IPR036852 GO:0004252|GO:0006508
Dod01g0838 589 Gene3D Peptidase S8/S53 domain 149 587 IPR036852 GO:0004252|GO:0006508
Dod01g0838 589 Pfam Subtilase family 148 581 IPR000209 GO:0006508|GO:0008236
Dod01g0838 589 CDD PA_subtilisin_like 354 478 - -
Dod01g0838 589 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 38 126 IPR037045 -
Dod01g0838 589 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Dod01g0838 589 Pfam Peptidase inhibitor I9 49 126 IPR010259 -
Dod01g0838 589 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Dod01g0838 589 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Dod01g0838 589 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Dod01g0838 589 CDD Peptidases_S8_3 124 580 IPR034197 -
Dod01g0838 589 SUPERFAMILY Protease propeptides/inhibitors 49 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0838 Dod-Chr1 15224539 15230729 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0838 38 579 Subtilisin-like Serine Gene Family AT4G00230 66.974 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0838 - - gmx:100795950 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0838 01 15224539 15230729 Dod01g0838 01 15224539 15230729 ECH