Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0833 ATGGATAATAATGGTTCACCATCTCCATACCGGTATCCAAATCCATACTATTACCCTCCCAATCCTCATCCACCATCATACCCTCCTCCTGGTCCAGGTCCAGGTCCTGATCCATATGCACATGTTCCTTATCCATACCCTTACACTTCTTCATATTCTTTAAACTATTCCTATCCCCAACCACCTCCTAGACCAACCTTATCATACTCCCATTCTGGCCAATTTGATTCTTCCTATCCCCCTCCTCCTCAACCTCCCTTCTCAGCCCCTCACACTGCCCCCTTGGACTATAACCGCCCTCCTGCGTCATCTTATGCTCCTTCTGCCCCTTACCCTTACCCCTACCATGTTCCACCAGGGACTCACAGTTCTCCTGGGCCTTCCTTTTCACACAGTGCTAGCTTCCAATATGGATCATCTCAGCACTATTATCAGCAAAATGAGGCGTATTCGGCTCCTGAAGAAGAGTCCAACGCCCATTCGCGCACGAATAGCTTCTCAGGTCCTTACTGGCCGGAGAGCACTGGCTCCACAGGAGGTGGAGTATCACAAACTGGTGACAGTTCCAAGCCTTCTGAGAGTATTGCTTACCCGCCTTTGGATGATCTTATGAGCGATGTTCGGTTGTCTGATAGCAGCCAACCCAGTGATCTTGCTCCATCAATGCCTGCTGCACAATCGAGGCCCCTGATGTATTCCACTTCAGTTCCAAAGCAACAGAAGAAAGAAGACTTTTATGGATATTCTAATAACTCCTTCTCAGGTTTGGGATCCTCCTCCCCGGATCAGTTGGATTCGTCTAAACTCTCAGATTATTCTGGCTCTTTTGATGACTCTATGCATAGTCAAAGCATGCAGATTGTTCCAACACAGGGCAAAGGGTCCTTGAGAGTTTTGCTTCTACATGGAAATTTGGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGATATGTTCCACAGGACACTGGGGGATATGTTTGGTAAATTACCTGGCGGTGTGAGCAACAAAATTGAAGGGACTATGAATAAGAAGATTACCAGTGATCCTTATGTGTCGATTTCAGTGTCAAATGCTGTGATTGGGAGAACTTTTGTGATTAGCAACAGCGAAAATCCTGTTTGGAAGCAACATTTCTTTGTTCCTGTTGCACATCATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATATTGTGGGTTCGCAGCTCATTGGCATTGCGGCAGTTCCAGTGGAACAGATATACTCAGGGGCAAAAGTTGAAGGCACCTACCCTATCCTGAATCAGAATAATGGGAAGCCTTGTAAGCCAGGTGCTGTCCTCAGTCTATCCATTCAGTATATCCCAATGGAGAAACTGAGCATTTATCATCAAGGTGTTGGAGCTGGGCCTGAGTACTTTGGGGTTCCTGCAACATATTTTCCTTTGAGGAAAGGTGGAACTGTCACTCTATATCAAGATGCTCACGTTCCCGATGGAAGCCTCCCTAATGTGTTGCTTGACAATGGGATGTATTATGTGCATGGAAAGTGTTGGGTTGACATCTTTGATGCCATATGCCAAGCTCGGCATTTGATTTATATTACAGGGTGGTCAGTGTGGCATAAAGTTACATTGGTAAGGGATGGTGCTGGTCCAGCATCTAATTATACCTTGGGTGATCTTCTGAGGTCAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGACCCTACATCAAGAAGCATTCTTGGTTATAAAACAGAAGGTGTCATGGCAACTCATGATGAGGAAACACGACGATTTTTCAAGCAGTCTTCAGTGCAGGTGCTGCTTTGTCCTCGCATTGCTGGTAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACAATATATACTCATCATCAGAAAACGGTAATTGTGGATGCTGATGCTGGAAATAACCTGAGAAAAATTGTAGCATTTGTCGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTTTACTTAGGACACTGCAGACACTACATAAGGATGACTATCACAACCCTACTTTCACGGGAAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCCAAAATTGATGGTCCTGCAGCTTATGATGTTTTGAAAAACTTTGAGCAGCGCTGGTTCAGAGCTTCAAAACCTCATGGGATTAAAAAGCTGAAAATGTCATATGATGATGCTTTGCTTAGGTTGGAAAGAATTCCATCCATCATTGGCATGAATGATGTTCCTTGTGCTGGTGATGATGATCCTGAATCTTGGCATGTTCAGATATTTCGCTCAATCGATTCAAATTCCGTTAAAGGATTTCCAAAGGATCCAAGAGATGCAACTAGCGAGAACCTAGTATGTGGGAAGAACGTGCTGATTGACATGAGCATACACACAGCATATGTGAAAGCCATCCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATCCCAATGGAAATTGCTCTAAAGATAGCTGAAAAAATAAACGCAAATGAGAGATTTGCAGTGTATATTGTTATTCCAATGTGGCCAGAGGGTGTTCCAACTGGGGCTGCCACACAAAGGATTCTATTTTGGCAGAATAAAACAATGCAGATGATGTATGAGACAATTTACAAGGCTTTGGTCGAGGCAGGGCTAGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGCAATAGGGAGGCCATAGATATGTATGATAATGTCACAGTGTCAGGAACTCCTCCACCAGCAAATAGTCCACAAGCTGCTAGTCGAAATAGCAGGCGTTTCATGATTTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGTTCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCCTACCAACCGCATTATACCTGGGCAAGAAATGATTCTTATCCACACGGACAAATACATGGATACAGGATGTCACTTTGGGCAGAACATACAGGAACAATTGAAGACTGCTTCCTGCAACCTGAGAGCCTTGAATGTGTGAGAAGGATAAGAGCAATGGGTGAAATGAACTGGAAACAATTTTCAGCAAATGAAATTACTGAGATGAGAGGGCATCTACTCAAATATCCTGTAGAAGTTGATCGAAAGGGCAAAGTTAGATCCCTTCCTGGCCATGAAGAGTTCCCTGATGTGGGGGGGAAAATAGTTGGATCATTCCTTGCCATGAAGGAGAATCTAACCATTTGA 3360 0.4375 MDNNGSPSPYRYPNPYYYPPNPHPPSYPPPGPGPGPDPYAHVPYPYPYTSSYSLNYSYPQPPPRPTLSYSHSGQFDSSYPPPPQPPFSAPHTAPLDYNRPPASSYAPSAPYPYPYHVPPGTHSSPGPSFSHSASFQYGSSQHYYQQNEAYSAPEEESNAHSRTNSFSGPYWPESTGSTGGGVSQTGDSSKPSESIAYPPLDDLMSDVRLSDSSQPSDLAPSMPAAQSRPLMYSTSVPKQQKKEDFYGYSNNSFSGLGSSSPDQLDSSKLSDYSGSFDDSMHSQSMQIVPTQGKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHRTLGDMFGKLPGGVSNKIEGTMNKKITSDPYVSISVSNAVIGRTFVISNSENPVWKQHFFVPVAHHAAEVHFVVKDSDIVGSQLIGIAAVPVEQIYSGAKVEGTYPILNQNNGKPCKPGAVLSLSIQYIPMEKLSIYHQGVGAGPEYFGVPATYFPLRKGGTVTLYQDAHVPDGSLPNVLLDNGMYYVHGKCWVDIFDAICQARHLIYITGWSVWHKVTLVRDGAGPASNYTLGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTEGVMATHDEETRRFFKQSSVQVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTVIVDADAGNNLRKIVAFVGGLDLCDGRYDTPHHPLLRTLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLKNFEQRWFRASKPHGIKKLKMSYDDALLRLERIPSIIGMNDVPCAGDDDPESWHVQIFRSIDSNSVKGFPKDPRDATSENLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKINANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAIDMYDNVTVSGTPPPANSPQAASRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARNDSYPHGQIHGYRMSLWAEHTGTIEDCFLQPESLECVRRIRAMGEMNWKQFSANEITEMRGHLLKYPVEVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0833 1119 SUPERFAMILY Phospholipase D/nuclease 794 1051 - -
Dod01g0833 1119 PANTHER PHOSPHOLIPASE D ALPHA 1 203 1119 - -
Dod01g0833 1119 MobiDBLite consensus disorder prediction 21 40 - -
Dod01g0833 1119 Gene3D C2 domain 298 437 IPR035892 -
Dod01g0833 1119 Gene3D Endonuclease Chain A 508 745 - -
Dod01g0833 1119 MobiDBLite consensus disorder prediction 55 236 - -
Dod01g0833 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 630 665 IPR001736 GO:0003824
Dod01g0833 1119 MobiDBLite consensus disorder prediction 207 236 - -
Dod01g0833 1119 Pfam Phospholipase D C terminal 1039 1109 IPR024632 -
Dod01g0833 1119 CDD C2_plant_PLD 298 451 - -
Dod01g0833 1119 SMART pld_4 630 665 IPR001736 GO:0003824
Dod01g0833 1119 SMART pld_4 965 992 IPR001736 GO:0003824
Dod01g0833 1119 ProSiteProfiles C2 domain profile. 281 427 IPR000008 -
Dod01g0833 1119 PANTHER PHOSPHOLIPASE D 203 1119 IPR015679 -
Dod01g0833 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 965 992 IPR001736 GO:0003824
Dod01g0833 1119 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 301 452 IPR035892 -
Dod01g0833 1119 MobiDBLite consensus disorder prediction 256 277 - -
Dod01g0833 1119 SUPERFAMILY Phospholipase D/nuclease 497 729 - -
Dod01g0833 1119 Gene3D Endonuclease Chain A 780 1018 - -
Dod01g0833 1119 Pfam Phospholipase D Active site motif 631 665 IPR001736 GO:0003824
Dod01g0833 1119 Pfam Phospholipase D Active site motif 966 992 IPR001736 GO:0003824
Dod01g0833 1119 SMART C2_3c 304 426 IPR000008 -
Dod01g0833 1119 MobiDBLite consensus disorder prediction 105 121 - -
Dod01g0833 1119 MobiDBLite consensus disorder prediction 123 192 - -
Dod01g0833 1119 Pfam C2 domain 303 429 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0833 Dod-Chr1 15168623 15176585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0833 68 1119 Phospholipase D Gene Family (Wang group) AT2G42010 69.039 0.0 1469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0833 K01115 - gmx:100791059 1783.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0833 01 15168623 15176585 Dod01g0833 01 15168623 15176585 ECH