Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0815 ATGAGTTTTGGGGGGTTCCTTGAGAACAAGCCAGGTGGTGGAGGAGGAAATGGTGGTGGTGGTGGTGGTAGAATCGTAGCAGATATACCTTACGCCAACGGTTCTAACCACAACCACAACAACATCAACATCATAAGCAGCAGCGATATAACAACAACAACAATGCCCTCTGGTGCAATCTCACAGCCCCGTTTGGCCACTCCCACGTTGGCCAAATCCATGTTCAACAACTCACCTGGCCTCTCTCTTGCACTTCAAACGAATATAGATGGGCAAGTTGGGGATATTGTGAATAATAACAGGTTGGTGGCTGAGAATTTTGAGGGAAATAATGGGTTGAGAAGGAGCAGAGAAGAAGAGCATGAAAGCAGATCTGGAAGTGATAACATGGACGGTGTTTCTGGTGATGATCTTGATGCCGCCGACAACATCCCGCCAAGGAAGAAGCGTTATCACCGACACACCCCTCAGCAGATACAAGAACTTGAAGCGCTGTTCAAGGAGTGTCCTCACCCAGATGAAAAGCAAAGACTTGAACTGAGCAAAAGGCTTTGCTTGGAAACGAGGCAGGTTAAGTTTTGGTTCCAAAATAGAAGAACTCAAATGAAGACACAATTAGAACGCCATGAGAACACACTGCTTAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCCTTGAGAGAAGCCATGAGGAATCCAATATGCACAAACTGTGGAGGTCCAACCATTGTTGGTGACATCTCATTGGAAGAACAGCACCTTAGGATTGAGAATGCTAGGTTGAAGGATGAGCTAGACCGGGTTTGTGCACTTGCTGGAAAGTTCTTGGGGCGCCCCATTTCCTCTTTGGCAAACTCAATTTCCCCTCCATTGCCAAACTCAAGCTTGGAGCTTGGTGTTGGGAGCAACAATGGCTTTGGTGGTTTGAGCACTGTGACTTCAACATTGCCTCTAGGGCCTGATTTTGGAATGGGGATATCAGGCCCTTTAGGCATGGTGTCACCTCCTCCAACTAGGCCAAATGCAACAACAAATGTGCCTCCTAATGTCGTCGCTTCTTCAGGATTTGACAGATCAATGGAGAGGTCGATGCTTCTTGAGCTTGCTTTGGCCGCAATGGATGAGTTGGTGAAGATGGCTCAGACTGGTGACCCTCTTTGGATAAGGAGCTTTGAAGGGGGAAGAGAGATCCTTAACCATGAGGAGTACACAAGGACCATGACCCCTTGCATTGGCTTGAGACCCAATGGCTTTGTCTCCGAGGCTTCTAGAGAAACTGGCATGGTTATTATCAACAGCTTGGCCCTTGTTGAGACTTTAATGGACTCAAATCGATGGTCAGAGATGTTCCCTTGTATGATTGCAAGGACTTCTACAACTGACCTGATATGTAGTGGAATAAATGGAAGTAGAAATGGTGCACTTCAACTAATGCATGCTGAACTTCAAGTACTTTCACCCTTGGTTCCTGTTCGTGAGGTCAATTTTTTACGGTTTTGCAAGCAGCACTCTGAGGGGGTGTGGGCAGTGGTTGATGTGTCAATAGATACCATCCGGGAACCTTCTGGCGCACCAACTTTTGTAAGCTGCAGGAGGCTTCCTTCTGGCTGTGTGATGCAAGATATGCCAAATGGTTACTCGAAGGTGACATGGGTGGAGCATGCAGAATATGACGAAAGCCAAATCCACCAGATCTACAGGCCCTTGGTGAGCTCAGGCATGGGCTTTGGTGCACAGCGTTGGGTTGCCACCCTTCAACGACAATGCGAGTGCCTAGCCATCCTAATGTCCTCAGCAGTTTCCCCTCGAGAACACTCCGCGATAACATCAGGCGGAAGGCGAAGCATGCTGAAGCTGGCGCAGCGCATGACCAACAACTTCTGTGCCGGTGTTTGTGCCTCGACAGTGCACAAATGGAACAAGCTCAATGCCGGCAATGTGGGCGAGGATGTGAGGGTGATGACGAGGAAGAGCCAGGACAATCCCGGGGAGCTGCCCGGGATCGTGCTGAGCGCAGCCACATCTGTGTGGCTGCCAGTCTCGCCACAGAGGCTGTTCGATTTCCTCCGCAACGAGAGACTGAGGAGCGACTGGGACATTCTGTCCAATGGCGGACCCATGCAGGAGATGGCTCACATTGCCAAGGGACAAGACCACGGCAACTGCGTTTCCCTCTTACGAGCCGGTGCTCTGAATTCAAACCAAAGCAGCATGCTGATTTTGCAGGAGACATGCAAAGACGCGTCCGGGTCGCTTGTAGTGTACGCGCCGGTGGACATTCCCGCAATGCACTTGGTCATGAACGGCGGCGACTCGGCCTATGTGGCGCTTCTGCCGTCTGGATTCGCCATCGCGCCGGATGGATCTAGCAGTAGAAGCGACCACAATGTTGTGTCGCAGCCAGAACCAAGTGGGTCCCTTCTTACGGTTGCATTTCAAATTCTCGTGAACAGCCTCCCCTCGGCAAAGCTCACGGTGGAGTCAGTGGAGACGGTGAACAACCTCATCTCATGCACCGTTCAGAAGATAAAAGCAGCGCTTCAATGTGAGGGCTGA 2562 0.5035 MSFGGFLENKPGGGGGNGGGGGGRIVADIPYANGSNHNHNNINIISSSDITTTTMPSGAISQPRLATPTLAKSMFNNSPGLSLALQTNIDGQVGDIVNNNRLVAENFEGNNGLRRSREEEHESRSGSDNMDGVSGDDLDAADNIPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSLREAMRNPICTNCGGPTIVGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLANSISPPLPNSSLELGVGSNNGFGGLSTVTSTLPLGPDFGMGISGPLGMVSPPPTRPNATTNVPPNVVASSGFDRSMERSMLLELALAAMDELVKMAQTGDPLWIRSFEGGREILNHEEYTRTMTPCIGLRPNGFVSEASRETGMVIINSLALVETLMDSNRWSEMFPCMIARTSTTDLICSGINGSRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHSEGVWAVVDVSIDTIREPSGAPTFVSCRRLPSGCVMQDMPNGYSKVTWVEHAEYDESQIHQIYRPLVSSGMGFGAQRWVATLQRQCECLAILMSSAVSPREHSAITSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSQDNPGELPGIVLSAATSVWLPVSPQRLFDFLRNERLRSDWDILSNGGPMQEMAHIAKGQDHGNCVSLLRAGALNSNQSSMLILQETCKDASGSLVVYAPVDIPAMHLVMNGGDSAYVALLPSGFAIAPDGSSSRSDHNVVSQPEPSGSLLTVAFQILVNSLPSAKLTVESVETVNNLISCTVQKIKAALQCEG* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0815 853 SUPERFAMILY Bet v1-like 361 593 - -
Dod01g0815 853 Pfam Homeodomain 148 203 IPR001356 GO:0003677
Dod01g0815 853 CDD homeodomain 147 205 IPR001356 GO:0003677
Dod01g0815 853 SUPERFAMILY Homeodomain-like 132 205 IPR009057 -
Dod01g0815 853 ProSiteProfiles 'Homeobox' domain profile. 145 205 IPR001356 GO:0003677
Dod01g0815 853 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 97 850 - -
Dod01g0815 853 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 97 850 IPR042160 -
Dod01g0815 853 Pfam START domain 369 593 IPR002913 GO:0008289
Dod01g0815 853 ProSitePatterns 'Homeobox' domain signature. 180 203 IPR017970 GO:0000981|GO:0006355
Dod01g0815 853 MobiDBLite consensus disorder prediction 110 155 - -
Dod01g0815 853 Coils Coil 199 234 - -
Dod01g0815 853 MobiDBLite consensus disorder prediction 111 127 - -
Dod01g0815 853 SUPERFAMILY Bet v1-like 614 825 - -
Dod01g0815 853 CDD START_ArGLABRA2_like 364 592 - -
Dod01g0815 853 SMART HOX_1 146 209 IPR001356 GO:0003677
Dod01g0815 853 MobiDBLite consensus disorder prediction 1 21 - -
Dod01g0815 853 Gene3D - 469 592 IPR023393 -
Dod01g0815 853 Gene3D - 139 221 - -
Dod01g0815 853 SMART START_1 369 593 IPR002913 GO:0008289
Dod01g0815 853 ProSiteProfiles START domain profile. 360 596 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0815 Dod-Chr1 14834376 14840940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0815 1 852 Homeobox Transcription Factor Family AT3G61150 60.520 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod01g0815 START 1.8e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0815 K09338 - gmx:100783614 1341.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0815 01 14834376 14840940 Dod01g0815 01 14834376 14840940 ECH
Dod07g1899 07 49345232 49354614 Dod01g0815 01 14834376 14840940 ECH