Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0809 ATGGTGGAAGAGGGTGGAGATGAGGTTTCAGTTGATGCACTTTCCACAGAAGAATGGTTGTTGCATGCACAGGAACTTGTTCCTGTGGCACTTGATAAGGCAAGAGAGGTTAAGGGGTTCCCTGGTAGATGGAAGATGATCGTTTCGAAATTACAAGAGATCCCGTTGCATTTATCGGACTTGTCGTGCCACCCGTGTTTCTCGAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAGGACTCTCAGGGAAGAAATTGAGTTGGCTGAGTTGTGTATGAAGGAGAAGTATGAAGGTAAGCTTCGGATGCAAAGTGATCTTGATGCATTAACTGCGAAACTTGATTTGAATTTAAGGGATTGTGGCCTTCTGATCAAGACTGGGGTCCTTGGTGAGGCTACTTTGCCGTCGGCTGCTGCGTCTGGTCCTGCAGCGGAATCAGATGCCGCAACACACGGCAACATGAAGGAATTACTCGCGCGCCTTCAGATCGGTCACTTGGAAGCAAAGCACAAAGCTTTGGACAGTGTTGTTGAAGCCATGAGAGAAGATGAGAAGAATGTTTTGGCTGTTCTTGGGAGGAGCAACATTGCTGCTTTAGTTCAATTGCTCACAGCTACATCTCCGAGGATAAGAGAGAAGGCGGTTACTGTTATATCCTCGCTTGCAGAATCCGGTAGCTGCGAGAATTGGCTGGTTTCTGAAGGAGTTCTGCCGCCTCTTATAAGGCTCGTTGAATCAGGTAGTGCTGTGGGCAAAGAGAAGGCTACAATTTCCCTTCAGAGGCTGTCAATGTCAGCGGAAACAGCACGCGCAATAGTTGGACACGGCGGGGTTCGTCCACTGGTTGAGCTATGTCAAACTGGCGATTCGGTGTCACAAGCGGCTGCTGCTTGTACCTTGAAGAATGTATCAGCTGTTCCTGAGGTGAGACATGCTTTGGCTGAAGAAGGGATTGTGAGGGTTATGATCAATCTGCTAAACTGTGGAATTTTGTTGGGTTCCAAAGAGTATGCTGCTGAGTGCTTGCAGAATCTCACCGCAAGCAATGAGAATCTAAGGAGGAGTGTCATATCTGAAGGCGGTGTTCGTAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCCGTTGGTGCTTTGAGGAATTTGGTTGGATCAGTTCCTGAGGAAACTTTGGTTTCACTTGGTTTCCTCCCGCGTTTGGCTCATGTACTGAAGTCCGGATCCTTGGGAGCTCAACAAGCTGCTGCGTCTGCAATCTGCAGGGTTTGCACCTCATCAGAGATGAAGAAATCGGTAGGTGAAGCCGGATGCATTCCTAACCTTGTCAAGATGCTAGAGGCCAAATCAAACAGCGCTAGGGAGGTCGCCACGCAAGCAATTGCGAGCTTGATCAGTGTGTCCCAAAATCAAAGGGAAGTTAAGAAGGATGATAAGAGTGTGCCAAACCTGGTTCAATTGCTTGATCCAAGTCCACAAAACACTGCAAAGAAATATGCAGTTTCCTGCCTTGGATCACTTTCATCAAGTAAGAAATGCAAGAAGCTGATGATCTCATATGGGGCAATTGGATATCTGAAGAAACTCACAGAGATGGACATTCCAGGAGCTAAGAAGCTGCATGAGAAATTAGAAAGAGGGAACTTGAGGAGTTTTTTTAGCAAGAAATAG 1686 0.4715 MVEEGGDEVSVDALSTEEWLLHAQELVPVALDKAREVKGFPGRWKMIVSKLQEIPLHLSDLSCHPCFSKNALCKEQLQAVSRTLREEIELAELCMKEKYEGKLRMQSDLDALTAKLDLNLRDCGLLIKTGVLGEATLPSAAASGPAAESDAATHGNMKELLARLQIGHLEAKHKALDSVVEAMREDEKNVLAVLGRSNIAALVQLLTATSPRIREKAVTVISSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARAIVGHGGVRPLVELCQTGDSVSQAAAACTLKNVSAVPEVRHALAEEGIVRVMINLLNCGILLGSKEYAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEETLVSLGFLPRLAHVLKSGSLGAQQAAASAICRVCTSSEMKKSVGEAGCIPNLVKMLEAKSNSAREVATQAIASLISVSQNQREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHEKLERGNLRSFFSKK* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0809 561 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 561 - -
Dod01g0809 561 Pfam Armadillo/beta-catenin-like repeat 272 307 IPR000225 GO:0005515
Dod01g0809 561 Gene3D - 147 375 IPR011989 -
Dod01g0809 561 SMART arm_5 391 430 IPR000225 GO:0005515
Dod01g0809 561 SMART arm_5 351 390 IPR000225 GO:0005515
Dod01g0809 561 SMART arm_5 473 514 IPR000225 GO:0005515
Dod01g0809 561 SMART arm_5 309 350 IPR000225 GO:0005515
Dod01g0809 561 SMART arm_5 268 308 IPR000225 GO:0005515
Dod01g0809 561 SMART arm_5 186 226 IPR000225 GO:0005515
Dod01g0809 561 SMART arm_5 431 471 IPR000225 GO:0005515
Dod01g0809 561 Gene3D - 376 539 IPR011989 -
Dod01g0809 561 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 561 - -
Dod01g0809 561 SUPERFAMILY ARM repeat 155 538 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0809 Dod-Chr1 14720455 14724258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0809 207 480 U-box Gene Family AT3G54790 29.032 8.17e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0809 - - gmx:100781453 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0809 01 14720455 14724258 Dod01g0809 01 14720455 14724258 ECH