Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0807 ATGATGGGTTCAGGTACCAATTTGGTGACCACGGTCATTGGTTTTGGGATGAGTGCAACTTTCATTGTGTTTGTCTGCACAAGAATAATTTGTGGAAGGCTAAGAGGGAGTGCTGAATCTCGCATGGTGTATGAGATTGAATCAAGGATTGACATAGAACAGCCAGAACATCTTGTTAATGAACCTGAACCCGAGCCTGTTCTGCTTGATGCAATCCCTACTTTGAAGTTCAATGAAGAGGCCTTTCGTTCCATTGAAGATACACAGTGTGTCATATGTTTGGCGGATTACAGAGAAAGAGAAGTGTTGCGCATCATGCCCAAATGTGGCCACACCTTTCATCTTTCTTGCATCGATATATGGCTGAGAAAACAATCTACCTGTCCGGTATGTCGTCTGCCATTGAAAAACTCTTCTGAAACAAAACATGTGAGGCCTGTGACATTTACCATGAGCCAACCTCTTGATGAGCCTCACACAACAGAAAGGAATGAAGATATTGAGAGCCATGTTGAACCTGCTGCTAGTAACTCCTTGCAACCAACTACTGGAGAACCAGAAGCAAGGCAATGA 573 0.4363 MMGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGSAESRMVYEIESRIDIEQPEHLVNEPEPEPVLLDAIPTLKFNEEAFRSIEDTQCVICLADYREREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQPLDEPHTTERNEDIESHVEPAASNSLQPTTGEPEARQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0807 190 MobiDBLite consensus disorder prediction 171 190 - -
Dod01g0807 190 MobiDBLite consensus disorder prediction 152 190 - -
Dod01g0807 190 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Dod01g0807 190 SMART ring_2 90 131 IPR001841 -
Dod01g0807 190 Pfam Ring finger domain 89 132 IPR001841 -
Dod01g0807 190 CDD RING-H2_EL5_like 89 132 - -
Dod01g0807 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 142 IPR013083 -
Dod01g0807 190 PANTHER OS02G0676500 PROTEIN 1 167 - -
Dod01g0807 190 PANTHER OS11G0150450 PROTEIN 1 167 - -
Dod01g0807 190 SUPERFAMILY RING/U-box 81 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0807 Dod-Chr1 14695760 14697780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0807 79 135 C3H Transcription Factor Family AT4G10160 56.140 1.28e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0807 - - ccaj:109802319 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0807 01 14695760 14697780 Dod01g0807 01 14695760 14697780 ECH