Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0774 ATGGGTAGGACACCTTGTTGTGACAAGAAGGGCTTGAAGAAAGGACCATGGACAGCTGAAGAAGATGAAATTCTTTGTAATTATATCAAGAAGAATGGTGGTCATGGTAGCTGGCGTTCTCTCCCCAAGATCACAGGTCTTCTTCGTTGTGGTAAGAGTTGCCGGCTTAGGTGGACAAACTATCTCAGACCTGACATTAAACGTGGTCCCTTTACTCCTGAGGAAGAAAAACTTGTCATACAGCTTCATGGCATCCTAGGAAATAGGTGGGCTGCTATTGCCTCTCAGTTACCCGGAAGGACAGATAATGAGATCAAGAACCTATGGAACACACACTTGAAGAAGCGCCTCAAAAGCATGGGAATTGACCCCAAGACACATGAGCCAGTGGCATCACCACATTACCTCATCGATAAGGCACATGGATCGTCTGTTTCGACGCGCCACATGGCTCAATGGGAGAGTGCTAGGCTTGAAGCAGAAGCCAGGCTCTCAACTGAGTCATCACTATTCAACAACAACAACAACAATCCCACTTCCTCTGCCAATGACAATAGTAATGATTCCGATTACTTCCTTCGCATATGGAACTCTGAGGTCGGCAAGGCGTTTCGCAATGTTCACAAATCAGACAACAAAAGTAGATGCTGCCAGAGTCCAATTTCAGTAGGATCATCTTCCAACAAGTGTGACTCAGTTTCTGCTGTAACAGCAGAGTTGGCCTCAAGCCAATTAGGACCCTCAAACATTGTTGTTAGCAATGTGAAAGAAGAGTTGTTGGAGTGTGCTGAAGGTGTGGTTCATGGTTCTGATTCATCAAGCTCTAATGACTTGGAAGACTCATCTGACACTGCCTTGCAGCTCTTGTTAGATTTTCCTATAAACAATGACATGAGCTTCTTAGAAGCAAGCCCTTTTTTTGCCCCATTTAGTGGTATGCCTTTGTATGATATTGTGTAA 960 0.4469 MGRTPCCDKKGLKKGPWTAEEDEILCNYIKKNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLKSMGIDPKTHEPVASPHYLIDKAHGSSVSTRHMAQWESARLEAEARLSTESSLFNNNNNNPTSSANDNSNDSDYFLRIWNSEVGKAFRNVHKSDNKSRCCQSPISVGSSSNKCDSVSAVTAELASSQLGPSNIVVSNVKEELLECAEGVVHGSDSSSSNDLEDSSDTALQLLLDFPINNDMSFLEASPFFAPFSGMPLYDIV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0774 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Dod01g0774 319 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dod01g0774 319 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Dod01g0774 319 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Dod01g0774 319 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Dod01g0774 319 CDD SANT 16 62 IPR001005 -
Dod01g0774 319 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Dod01g0774 319 Gene3D - 70 133 - -
Dod01g0774 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 307 - -
Dod01g0774 319 PANTHER PROTEIN ODORANT1-LIKE 1 307 - -
Dod01g0774 319 SMART sant 13 64 IPR001005 -
Dod01g0774 319 SMART sant 67 115 IPR001005 -
Dod01g0774 319 CDD SANT 70 113 IPR001005 -
Dod01g0774 319 Gene3D - 11 68 - -
Dod01g0774 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0774 Dod-Chr1 14198700 14202317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0774 1 302 MYB Transcription Factor Family AT3G61250 62.951 5.28e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod01g0774 Myb_DNA-binding 3.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0774 K09422 - gmx:100800408 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0774 01 14198700 14202317 Dod07g1925 07 49728693 49731598 PCT