Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0768 ATGGATCGCGGGGACCAAATGGCGTTATCTGGGTCTGCATCTTACTATATGCAGCAGAGAGGAATAGCTGGTCCTGGAGCACAACCTGAATTTTCGCCTAGTATTCGAACACTGTCTAATCCTAACTTACCATTTCAATCCAACATTGGTGGTGGTGGTGGTACAGTTGGATCCACTTTGCCGTTAGAATCTTCAGCGATCTCATCTCATGGTGTCAATGTGGGTGCTCCTCCTGGGGCACCACCTGGGGAACCTGTTAAGAGGAAGAGAGGAAGGCCAAGGAAATATGGGTCTGATGGAACTGTGTTGGCATTGACACCAACATCATCTAGTCATCCTGGAGCCTTGACACAAGGACAGAAACGGGGCAGAGGGCGTCCCCCTGGGACTGGGAAGAAACAGCGATTGGCATCTCTTGGTGAAATGATGTCTGGTTCAGCTGGGATGGGATTCACTCCTCATGTCATCAACATTGCAAGTGGAGAAGACATTGCTACAAAAATTATGGCATTTGCTCAGCAGGGGCCTAGAGCTGTATTCATTTTGTCAGCCAATGGTGCTGTTTCTACTGTCACACTTCGTCAGCCTTCAACTTCAGGTGGCTCTGTCACATATGAGGGGCGTTTTGAGATATTGTGCCTGTCAGGCTCTTACTTGCTTACTGATAATGGTGGCTCACGCAATCGAACTGGTGGACTAAGTGTTTCCCTTGCTAGTCCTGATGGCCGCGTCATTGGTGGAGGAGTTGGAGGAGTCCTTATTGCATCAAGTCCTGTTCAGGTGATAGTTGGGAGCTTTATATGGGGTGGATCAAGGACAAAGAACAAGAAAAAGGAAAGCTCCGAAGGCGCAGAAGTTGCCATGGAGTCGGAACATCAGGCAGTTCATAATCCAGTTGCAATGAATAGCATTTCACCAAATCAAAATCTTACTCCAACCTCATCTCTGAGTCCTTGGCCAGCATCGCGTCAGTTGGACATGCACCATTCTCATGTTGACATCGATTTAATGCGTGGGTGA 1020 0.4824 MDRGDQMALSGSASYYMQQRGIAGPGAQPEFSPSIRTLSNPNLPFQSNIGGGGGTVGSTLPLESSAISSHGVNVGAPPGAPPGEPVKRKRGRPRKYGSDGTVLALTPTSSSHPGALTQGQKRGRGRPPGTGKKQRLASLGEMMSGSAGMGFTPHVINIASGEDIATKIMAFAQQGPRAVFILSANGAVSTVTLRQPSTSGGSVTYEGRFEILCLSGSYLLTDNGGSRNRTGGLSVSLASPDGRVIGGGVGGVLIASSPVQVIVGSFIWGGSRTKNKKKESSEGAEVAMESEHQAVHNPVAMNSISPNQNLTPTSSLSPWPASRQLDMHHSHVDIDLMRG* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0768 339 MobiDBLite consensus disorder prediction 302 321 - -
Dod01g0768 339 Gene3D - 153 294 - -
Dod01g0768 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 315 - -
Dod01g0768 339 MobiDBLite consensus disorder prediction 102 117 - -
Dod01g0768 339 ProSiteProfiles PPC domain profile profile. 147 289 IPR005175 -
Dod01g0768 339 CDD DUF296 152 266 IPR005175 -
Dod01g0768 339 MobiDBLite consensus disorder prediction 32 71 - -
Dod01g0768 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 266 IPR005175 -
Dod01g0768 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 268 - -
Dod01g0768 339 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Dod01g0768 339 SMART AT_hook_2 121 133 IPR017956 GO:0003677
Dod01g0768 339 MobiDBLite consensus disorder prediction 20 135 - -
Dod01g0768 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 315 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0768 Dod-Chr1 14043046 14049419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0768 1 339 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.000 1.14e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0768 - - gmx:100814615 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0768 01 14043046 14049419 Dod01g0768 01 14043046 14049419 ECH
Dod01g0768 01 14043046 14049419 Dod07g1930 07 49818239 49825034 PCT