Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0745 ATGACTTACAAAGAAACAGTAGTGGGGTTTGGACTGAAAACACGCACGGACGACGCACGAAGTGGTGTTCTGCTTCTTGCTCCTTATGGACTTCAACAACAAGATGCTCAAAGCTTGACCCCGTGGAGGTTGAGTTGGGTGGAAAACTCTTATAGCGCTGCAGTAGAGGATTCTAGAGAGGAAGCTAAGATCTGGGTGGATATTGAAAGAGACAAATACTTGATTGCTGCAACAAGACACATTGGGAGGGCAACCAGAGATGCCAACAAGATTATGGCAGGTCTTGACACCCAATTGCATTCCATGACCAAAGCCCTTGAGGCGGAGGAGGAGGAGGAAGAGATCGAGGAGGTGGAGGAGGAGGAGAAGGAGGAGGAGGGACATAGTGCCTTCCAAGATAGGCTTAATGCCATTGAGGAGATAATCATGAGATGGGAGGAAGATCAGTCTATGATTTGGGATTCTAGACCAGATGAAGCATCTGAGTATGTAAATGCAGCTGATGAAGCCCGCAGATTAATTGAAAAGTTGGAGACCTTGCATTTGAGCAAAGAGGACCAAGAGTTCAAGTTTTTGCATAGGGCTTACAATGTTCTTCAAACAGCTATGGCACGACTTGAAGAAGAGTTCACGAACTTGCTTATCCAGAACTGGAAACCTTTTGAGCCTTTTGACTTTGTCACTTCTAGTTCCGCATCATATGAGGAGGAAAATGTTGCTGACGAGAGTTCTTTGGCGTCTTTAGGTGGTGGGATCCATCCTCTGACCAGATATGTCATGAATTATCTTAAAACTCTATATGACTATGGCGAAACGCTTAATCTGCTTTTGAAGGACAAAGAAGTCAAGGATGCCATCAAGGATGCCATCTTGAGCTCACCTGATATGAACCCAAATACTGAAGAAGATATCAAAACCCAGGTTTCCTCGATGGCCTATCACTTCCGGTCAGTTGCTTCAATCTTGGAAAGCAACCTTGCTGACAAGTCCAAGCTTTACGAAGATGCTTCCTTGCAGCACCTGTTCTTAATGAACAACATACACTACATGGCTGAAATGGTCAAGGGGTCTGAACTTAGGTTGATATATGGAGATGAATGGATTCGAAAATGCTACCGGAAGTATGGCCATCATGCAATGAATTATGAGAGAACTAGTTTGAGTTCCATTCTGTCCTTGCTTAAGGGTGAGGGACTTCATATGCCGGTTACCTTTTTTCTCTCACAAAGTCTTGTTAAGGAGAGGTTAAGGAACTTTTACGATGCCTTTGGGGATCTCTACAGGGTCCAAACAGCTTGGGTTGTACCAGATGCTCAGCTTCGGGAAGAATCGCGAATCTCACTCTCTCTCAAACTAATCCATGCTTACAGGACATTTGTGGGGAGATACTGTAGAGACGTAAGTGACAAACACATTAAATACAGTGCTGATGATCTGGAAATTTATCTTTTGGATTTCTTTGAGGGAGCTGCAAAATCATTGGAAAGTCCCATAAGAGGTAACAGATAG 1509 0.44 MTYKETVVGFGLKTRTDDARSGVLLLAPYGLQQQDAQSLTPWRLSWVENSYSAAVEDSREEAKIWVDIERDKYLIAATRHIGRATRDANKIMAGLDTQLHSMTKALEAEEEEEEIEEVEEEEKEEEGHSAFQDRLNAIEEIIMRWEEDQSMIWDSRPDEASEYVNAADEARRLIEKLETLHLSKEDQEFKFLHRAYNVLQTAMARLEEEFTNLLIQNWKPFEPFDFVTSSSASYEEENVADESSLASLGGGIHPLTRYVMNYLKTLYDYGETLNLLLKDKEVKDAIKDAILSSPDMNPNTEEDIKTQVSSMAYHFRSVASILESNLADKSKLYEDASLQHLFLMNNIHYMAEMVKGSELRLIYGDEWIRKCYRKYGHHAMNYERTSLSSILSLLKGEGLHMPVTFFLSQSLVKERLRNFYDAFGDLYRVQTAWVVPDAQLREESRISLSLKLIHAYRTFVGRYCRDVSDKHIKYSADDLEIYLLDFFEGAAKSLESPIRGNR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0745 502 PANTHER EXOCYST COMPLEX PROTEIN EXO70 242 493 IPR004140 GO:0000145|GO:0006887
Dod01g0745 502 SUPERFAMILY Cullin repeat-like 243 488 IPR016159 -
Dod01g0745 502 Coils Coil 189 216 - -
Dod01g0745 502 SUPERFAMILY Cullin repeat-like 132 229 IPR016159 -
Dod01g0745 502 Coils Coil 160 187 - -
Dod01g0745 502 Coils Coil 92 128 - -
Dod01g0745 502 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 77 248 - -
Dod01g0745 502 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 242 493 - -
Dod01g0745 502 Gene3D Exocyst complex component Exo70 230 491 - -
Dod01g0745 502 PANTHER EXOCYST COMPLEX PROTEIN EXO70 77 248 IPR004140 GO:0000145|GO:0006887
Dod01g0745 502 Pfam Exo70 exocyst complex subunit 172 484 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0745 Dod-Chr1 13380844 13383252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0745 225 488 EXO70 exocyst subunit family AT5G61010 43.939 4.69e-63 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0745 K07195 - gmx:100799102 348.206