Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0742 ATGGACACAGGTACTGAAGAAGATATCAAAAGCCAGGTTTCTCTGATGGGCTATCGCTTCCGGACAGTTGCTTCAATCTTGGAATGCAAACTCGATGACATGTCCAAAAAGTTTTACAAAGATGCTTCCTTGCAGCACCTGTTCTTAATTAACAACATACACTACATGGCTGAAATGGTCAAGGGGTCTGAACTTAGGTTGATATATGGAGACAAATGGATTCGAAAACGCAACTGGGAGTGTCAGCAGCATGCAATGAAATTTGCGAGAACTGGTTTCAGTTCCATTCTGTCCTTGCTCAAGTTTGAGGGGCTTAATGTGCCGGGTACTCATTCTATCTCAAAAAGTCTTGTTAAGGAGAGGTTAAGGAGCTTTTATCATGTCTTTGGGGATCTTTACAGGGTCCAAACAGCTTGGTGTGTGCCAGATGCTCAGCTTCGGGAAGATTTGCGAATCTTTCTCTCTCTCAAATTAGTCCTAGCTTACAGGACATTTGTAGGGTTCCATAGTGGTTTCATAAGTGAAAAACACATTAAATACAGTGCTGATGATTTAGAAAATTATCTTTTGGATTTCTTTGAGGGGAGCTGCAAAATCATTGGAAAGTCGCAATAA 615 0.4114 MDTGTEEDIKSQVSLMGYRFRTVASILECKLDDMSKKFYKDASLQHLFLINNIHYMAEMVKGSELRLIYGDKWIRKRNWECQQHAMKFARTGFSSILSLLKFEGLNVPGTHSISKSLVKERLRSFYHVFGDLYRVQTAWCVPDAQLREDLRIFLSLKLVLAYRTFVGFHSGFISEKHIKYSADDLENYLLDFFEGSCKIIGKSQ* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0742 204 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 197 IPR004140 GO:0000145|GO:0006887
Dod01g0742 204 Gene3D Exocyst complex component Exo70 1 199 - -
Dod01g0742 204 Pfam Exo70 exocyst complex subunit 11 190 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod01g0742 204 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 197 - -
Dod01g0742 204 SUPERFAMILY Cullin repeat-like 12 194 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0742 Dod-Chr1 13349307 13350675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0742 7 200 EXO70 exocyst subunit family AT5G50380 41.346 8.94e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0742 K07195 - gmx:100799102 270.781