Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0724 ATGGGGTTCCCCGTAGGCTACACAGAAGTCCTTGTACCAACCACCTTCCTCCGCCTCCTCACCTTCCTCGCCGCTCTCCGAAACCTCGTACTCTCCCTCTTTCGCCTCCTCGGCCTCTCCGAACTCCTCGACACGACCACAACAACCACTACCACCTCCACCGACCCCTCGCTCCTCTCCTGGGCCCAATCCCAAGCCCAAGCCCACGGGCCCAATTACAATACCAACACCAACAACCCCTCCCTCTCCGCCCTCCTCATCCGCGAATTCCTCCCCATCATTAAATTCCGTGACCTGGCCGGCGCCGGTTCCGGAGACTCGTTCCCGGCGACGGAGAACGGCTGCGCGGTTTGCCTGAGCGAATTCTCCGGGGAGGAGGAGATCAGGTGTATGGTGAACTGCAGGCACGTTTTCCACCGGGGGTGCGTGGACCGTTGGATGGATCATGATCAGAGGACGTGCCCACTCTGTAGGACGCCCCTGGTGCCAGATCGAAAGGTTAATGAGTACAATCAACGGCTCTGGGAAGCTTCCGGTGTATCTGAATTCTATACGGATTAG 561 0.59 MGFPVGYTEVLVPTTFLRLLTFLAALRNLVLSLFRLLGLSELLDTTTTTTTTSTDPSLLSWAQSQAQAHGPNYNTNTNNPSLSALLIREFLPIIKFRDLAGAGSGDSFPATENGCAVCLSEFSGEEEIRCMVNCRHVFHRGCVDRWMDHDQRTCPLCRTPLVPDRKVNEYNQRLWEASGVSEFYTD* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0724 186 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 184 - -
Dod01g0724 186 SUPERFAMILY RING/U-box 114 168 - -
Dod01g0724 186 SMART ring_2 115 157 IPR001841 -
Dod01g0724 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 163 IPR013083 -
Dod01g0724 186 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 184 - -
Dod01g0724 186 Pfam Ring finger domain 115 158 IPR001841 -
Dod01g0724 186 ProSiteProfiles Zinc finger RING-type profile. 115 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0724 Dod-Chr1 13083324 13085578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0724 1 186 C3H Transcription Factor Family AT1G63840 40.426 2.21e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0724 K16281 - gmx:100813224 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0724 01 13083324 13085578 Dod07g1971 07 50306119 50306640 PCT