Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0712 ATGGCGTTTGCTATAGGTGAAGCCGCTTCTTCCTCTGCTCCCACCGGTACAACCCCACGCTCCTGCACCTATGATGTGTTCTTGAGTTTTAGGGGAGAAGACACTCGCAAAGGGTTCACTGATCATCTCTATGCTGCTTTGGCAAGGAAAGGAATCAGAACTTTTAGAGATGATAAGGAACTTGAGAGAGGTAAAGTTATTTCGTCAGAGCTCCTCAAAGCAATCGAAGAATCCATGTTTGCCATCACTGTTCTCTCACCAAACTATGCTTCCTCCACTTGGTGTTTGGATGAGCTCCAAAAGATTGTCGAGTGCAACCACAACTTGGGGTTGTCTGTTGTGCCGGTGTTCTATGGTGTGGAGCCTTGTGATGTGAGGCATCAAAAAGGAAGTTTTGAAAAAGCTTTCAGAGAACATGATGAGAGATTTGGACAAGATAGTGACAAGGTTAAAAAATGGAGAGATGCATTAAGACAAGTTGCAAGTTACTCTGGTTGGAATTCCAAAGACGAGCATGAGGCAGCATTTATTGAAAGCATTGCTCAACACATAAATAAAAAGCTTATTCCAAAACTATTGCCTTCTTGGGCAACAAACCTTGTTGGGATGGCTTCGAGGGTGGAGAAAGTAAACCGGCTCATAGCTACAGAGGTGCATGATGTTCGCTTTATAGGCATATGGGGCACAGGAGGCATAGGTAAGACTACTATTGCTAGAGCTCTGTATGAGGCCATGCAAGGTGAATTTGAAGACAGTTTCTTTATTGGGAATGTTAGAGAGGCATATGAGATAAATGGTTTGATTCACATACAAAGAGAACTTGTTTCTCATTTGAATATGAGTAGTACTAGTTTTTATAATATTTATATTGGAGAAGAGTCAATGGGGAACTCTCTATGTAACAAAAAGTTTCTTCTTGTTCTTGATGATATAAGTGAAGTAAGGCAGCTGGAAAACTTGGTTGGAAAGCAAAAACGTTTTGGTCTTGGAAGTAGGATAATAATCACGACTAGATACCTGAATTTGCTAAGAATATATGGAGTGCATGAAACTTTTGAGGTTGGATGCTTATTACAAAATGAAGCTCTTGAGTTTTTCTATTCGAAAGCCTTCAAACGAGATCGGCCTCAAGAAGAATATTTGGATTTGTCTAAAGAAATTGTGGAATATACTAGAGGTCTTCCATTAGCAATTGAGGTGTTGGGTTCCTATCTTTATGGAAGAGAGTTTAATGCATGGCATAGTGCTTTGAAACAAATAAAAAGCTTTCAACTTCCCAAAATTCAAGATGCAATTATGATAAGCTATGAAAGCTTGCTTCCAATGGAGAAGCATTTGTTTCTAGATATCGCGTGTTTCTTCAAAGGAATGGAAAAAAATAAAGCAATAGATATATTAGAAAATTGTGGTCATTCTCTGGGGACAGAAATTGACGTTTTGATAGAAAAATCTTTGGTAACTCTAGAACGGTGGAGTAATAATTTGGAGATGCATGATTTAGTTCAAGAAATGGGCAAGAATATTGTAGTTCAAGAATCTCCAAATGATCCTTGGAGACGTAGTAGATTGTGGTCTCAAGAAGAAATTAATGATGTGTTGACAAACAATAAGGGAACTGAAGCAATTCAAGGTATAGTTCTAAGCTCACTGGAACCATATAGAGCACACTGGAGCACTGACGCCTTCTTCAATACAAGTCAGCTGAAATTTCTCAGTTTATGTGACATGCAACTTCGCTTTGGCCTCAATTACCTTCCAAGTTCTCTAAAAGTTCTTCACTGGAAAGGTTGTCCTCTGAAAACGCTACCAATCACGGATCAATTAGTTGACATTAAGTTGGGGCATAGCAAAATTATACAACTTTGGAAAGGAGAAAAGAAACTGACAGAGATGAAGCACATTGAATTGAGTTTTTCCAAGAACATAAAGCGATTGCCCGATTTCTCTGGCCTTCCAAATCTTGAAACATTTGTTGCTGAAGGTTGTACCAAACTAATTGAGGTTCATCCGACCCTTCTACAGCACAAGAAAGTTGTGCTAATGAATTTAAAAGACTGCAAAAGTCTTAAAGCTCTTCCAAGCACACTGGAGATGGGTTCCCTAAAGAAGTTAATTCTTTGTGGTTGCTCTAAATTAAAATATCTCCCAGAGTTTGGGGTAAGTATGACACATCTCTCACTGCTCTCTTTGGAGGGAACTGCTATAAAAACTCTACCCAAATCACTTGGACGCCTAGTTGGCCTTCATGCTTTGAACTTAAAGGATTGCAAACGCCTTGTTTGGATTCCGGATACTATTCGTGGTTTGAAATGCCTCAGAGATCTGAATGTTTCGGGTTGCTCAAAGCTGCCAAATGGTTTAAGGGAAATGAAATTAAAGGAACTTTTTGCGAGTGGAACTTGTATTGAAGTGCATCAATTATCACTTGCTAGGTGGAGGCCAGTGAACTCTTGTCTTCTCAATTTGCTATGTGGGAGTGCACCAACTCCCTTTGGTTTCGGATTCCAACCTAGTTTTCCTTCATTGAGCAGTATGGATTTAAGTTACTGCAATTTATCTGAGCAATCATTCCCACATGATTTTTGCCACTTAACTTCATTGGAGTTTCTGAATCTAAGTGGTAACAGTTTTGTTGAAGCACCAGCAGGTATTCCTAAACTTTCAAAGCTGGAAATTCTTAAGTTAAATCATTGCCAAAAGCTTCAACTGTTGCCGGAGCTTCCATCAAGTATAAGAGAATTGGATGCGAGCAATTGCGATTCATTGAAAAATTCGGAATTCAATTCACGCATTCAATTAGCATCACTGACGAAATATCCCCCTAAGGAATTACTTCTTAGCCATGCAAGATTTGACATGGTGATCCCCGGCTGTGAGATTCCATCATGGTTTATCCATCAAGAAGAAGGCAGATATGTGTCGGTCCCTCATAATGAATGTGTGGCAATTGCTCTGTGTTTCCTAATAGTGAGCCATGCTGACCCATATGAGGAGAGCTATTATTCAGTAAAATGTTCATTGGCCGGTCGAATTGCTGATGCATACAATAATAGTTACACCGTCAGTGAAAGGGTGTTACCTCCACTGAAGCCAGATTGTCCTCACCTTTACATTCTCTTCTTGACGGATCAATTCAGCGACGGAATTCACCAAGATAGTCACTTTGGACTTACTAGTACCTGCCGTTTCTCAAAGCAAGTGGATTTGAAAATAGTGAGGTGTGGGGCCCGTTTGGTTAGTGAGCAAGATGTTTGA 3255 0.3978 MAFAIGEAASSSAPTGTTPRSCTYDVFLSFRGEDTRKGFTDHLYAALARKGIRTFRDDKELERGKVISSELLKAIEESMFAITVLSPNYASSTWCLDELQKIVECNHNLGLSVVPVFYGVEPCDVRHQKGSFEKAFREHDERFGQDSDKVKKWRDALRQVASYSGWNSKDEHEAAFIESIAQHINKKLIPKLLPSWATNLVGMASRVEKVNRLIATEVHDVRFIGIWGTGGIGKTTIARALYEAMQGEFEDSFFIGNVREAYEINGLIHIQRELVSHLNMSSTSFYNIYIGEESMGNSLCNKKFLLVLDDISEVRQLENLVGKQKRFGLGSRIIITTRYLNLLRIYGVHETFEVGCLLQNEALEFFYSKAFKRDRPQEEYLDLSKEIVEYTRGLPLAIEVLGSYLYGREFNAWHSALKQIKSFQLPKIQDAIMISYESLLPMEKHLFLDIACFFKGMEKNKAIDILENCGHSLGTEIDVLIEKSLVTLERWSNNLEMHDLVQEMGKNIVVQESPNDPWRRSRLWSQEEINDVLTNNKGTEAIQGIVLSSLEPYRAHWSTDAFFNTSQLKFLSLCDMQLRFGLNYLPSSLKVLHWKGCPLKTLPITDQLVDIKLGHSKIIQLWKGEKKLTEMKHIELSFSKNIKRLPDFSGLPNLETFVAEGCTKLIEVHPTLLQHKKVVLMNLKDCKSLKALPSTLEMGSLKKLILCGCSKLKYLPEFGVSMTHLSLLSLEGTAIKTLPKSLGRLVGLHALNLKDCKRLVWIPDTIRGLKCLRDLNVSGCSKLPNGLREMKLKELFASGTCIEVHQLSLARWRPVNSCLLNLLCGSAPTPFGFGFQPSFPSLSSMDLSYCNLSEQSFPHDFCHLTSLEFLNLSGNSFVEAPAGIPKLSKLEILKLNHCQKLQLLPELPSSIRELDASNCDSLKNSEFNSRIQLASLTKYPPKELLLSHARFDMVIPGCEIPSWFIHQEEGRYVSVPHNECVAIALCFLIVSHADPYEESYYSVKCSLAGRIADAYNNSYTVSERVLPPLKPDCPHLYILFLTDQFSDGIHQDSHFGLTSTCRFSKQVDLKIVRCGARLVSEQDV* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0712 1084 Gene3D - 18 187 IPR035897 -
Dod01g0712 1084 Gene3D Ribonuclease Inhibitor 717 949 IPR032675 -
Dod01g0712 1084 Gene3D - 188 351 IPR027417 -
Dod01g0712 1084 PANTHER TMV RESISTANCE PROTEIN N-LIKE 30 926 - -
Dod01g0712 1084 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 166 IPR035897 -
Dod01g0712 1084 Pfam NB-ARC domain 210 440 IPR002182 GO:0043531
Dod01g0712 1084 Pfam TIR domain 24 188 IPR000157 GO:0007165
Dod01g0712 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 450 IPR027417 -
Dod01g0712 1084 SUPERFAMILY L domain-like 547 937 - -
Dod01g0712 1084 Gene3D - 357 439 IPR042197 -
Dod01g0712 1084 SMART till_3 23 163 IPR000157 GO:0007165
Dod01g0712 1084 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 926 IPR044974 GO:0006952
Dod01g0712 1084 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Dod01g0712 1084 SUPERFAMILY "Winged helix" DNA-binding domain 427 533 IPR036390 -
Dod01g0712 1084 PRINTS Disease resistance protein signature 391 405 - -
Dod01g0712 1084 PRINTS Disease resistance protein signature 223 238 - -
Dod01g0712 1084 PRINTS Disease resistance protein signature 885 901 - -
Dod01g0712 1084 PRINTS Disease resistance protein signature 298 312 - -
Dod01g0712 1084 SMART LRR_typ_2 722 745 IPR003591 -
Dod01g0712 1084 SMART LRR_typ_2 864 887 IPR003591 -
Dod01g0712 1084 Gene3D Ribonuclease Inhibitor 555 716 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0712 Dod-Chr1 12377805 12396558 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0712 6 791 WRKY Transcription Factor Family AT4G12020 30.617 1.21e-97 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0712 - - gmx:100815486 1159.05