Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0705 ATGGCTAAACATGATTGTGGTTGTGGCAATGGCATAGCGGTCTTGTGGCTGAGCGCGACTAGAATAGCATCACCGATGATGGGCAACGGCACTGTAATGGCAGTGAGGTATGAGAAAAGGGGCGACGGTTCAAGCTTCCGAAGGTACGGTGGCAAGCGTGGGTGTGGGCACGGGCACAGGCATGGTGAGCAGCAACAGGTGCAGGCATGGTTTGAGGAAAAACTCGTCGAATGCATAGCTGAACACATACTACAAAAGCTTATTCCAAAACTCCCATCTTGCACAAAAAACCTTGTAGGGATTGATTCAAGGGTGAAGGAAGTGATTAGCCTCATAGGTATCGAGTTCAATGATGTTCGCTTTGTAGGCATATGGGGCATGGGTGGTATAGGTAAGACAACTATTGCTAGAGCAGTCTATGAAACAATCCGAGGTAATTTCAAAGTTAGTTGCTTCGTGAGAAATGGTAGGGAGTTGTCTGAGACAAATGATTTTGTTCACCTGCAAAAAGATATTCTTTCTTGTCTAAATATAAGCAGTAGTTATGATTTTTCTGATATAGAAGATGGAAGAAAGATAATAGGAAACTCCTTATGCAATAAGAAGGTTCTTCTTGTTCTTGATGATATAAATCAAGAAATCCAATTACAAAATTTGGCTTGGGAGCACGGTTGGTTTGGTCCTGGAAGCAGAATAATAATCACAACTAGAGATAAGCACTTGCTAAATAGATATGGAGTTTGTGGAACTTATGAGGTTAAAGGGTTAGACAGGGAAGAAGCCCGTCATCTCTTTTATTCGAAAGCCTTTAAACAAGATGAACCCAAAGACGAGTACTTAGAATTATCAAAAGAAGTGGTCAAATATACTAAAGGTCTTCCATCGGCGGTTGAGGTGTTGGGTTCCTACCTATATGGAAGAAATGTTGAGTTTTGGCATAATACTATTACAGAAATAAGGAGCGGTCCACATTTCGAAATTCTTAAGGCATTGAAAAAAAGTTATGATCATTTAATGCTGACAGAGAAGAATATTTTTCTAGATATTGCGTGCTTCTTCAACAGAATGAACAAAGATGAAGTTATACATGTATTAAAATCGTGCAATCATTATGTTGGAATTGGAAGTGAAATTGAAAGTGGAATTGTTACTTTGATTGACAAATCTTTGGTAACTTTGGATGAAAAAAATAGGTTGGAAATGCATGATTTGCTTCAAGAAATGGGCAAACATATTGTACATGAAGAATTTCCTAATAATCCTGGCAAACGTAGTAGGTTGTGGTCTAAAAATGACATTGATCAAGTGTTGACGAATGATATGGCGAAATTGAAGAGAACGGAGAACAAGGAGCTGCACCAGTATATGCAGCCAGGCTCAGATGGAGAAAAGATTTTGTGCATATGA 1407 0.3923 MAKHDCGCGNGIAVLWLSATRIASPMMGNGTVMAVRYEKRGDGSSFRRYGGKRGCGHGHRHGEQQQVQAWFEEKLVECIAEHILQKLIPKLPSCTKNLVGIDSRVKEVISLIGIEFNDVRFVGIWGMGGIGKTTIARAVYETIRGNFKVSCFVRNGRELSETNDFVHLQKDILSCLNISSSYDFSDIEDGRKIIGNSLCNKKVLLVLDDINQEIQLQNLAWEHGWFGPGSRIIITTRDKHLLNRYGVCGTYEVKGLDREEARHLFYSKAFKQDEPKDEYLELSKEVVKYTKGLPSAVEVLGSYLYGRNVEFWHNTITEIRSGPHFEILKALKKSYDHLMLTEKNIFLDIACFFNRMNKDEVIHVLKSCNHYVGIGSEIESGIVTLIDKSLVTLDEKNRLEMHDLLQEMGKHIVHEEFPNNPGKRSRLWSKNDIDQVLTNDMAKLKRTENKELHQYMQPGSDGEKILCI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0705 468 Pfam NB-ARC domain 117 338 IPR002182 GO:0043531
Dod01g0705 468 Gene3D - 77 247 IPR027417 -
Dod01g0705 468 Gene3D - 255 343 IPR042197 -
Dod01g0705 468 PRINTS Disease resistance protein signature 121 136 - -
Dod01g0705 468 PRINTS Disease resistance protein signature 197 211 - -
Dod01g0705 468 PRINTS Disease resistance protein signature 290 304 - -
Dod01g0705 468 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 95 440 - -
Dod01g0705 468 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 95 440 IPR044974 GO:0006952
Dod01g0705 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 349 IPR027417 -
Dod01g0705 468 SUPERFAMILY "Winged helix" DNA-binding domain 326 437 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0705 Dod-Chr1 12243432 12253827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0705 99 465 WRKY Transcription Factor Family AT5G45050 34.417 3.88e-55 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0705 - - aip:107635063 533.487