Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0687 ATGTCAATCTTCGATGGAGCTTTCATGGACACACAGCTCTCAAAGCGGACCTCAATCTTCGGCCTCCGTCTCTGGGTCGTCATCGGGGTCCTCGTCGGCGCCCTCATCGTCTTCACCCTCTTCCTCCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCGCCGCGCCGTAGCCGGGAAACTCGCAGGAGCAACCCCCTCCAAGGAGATCCAGGAGATAGTCCACCTGCCCGGACCCCATATGCTCCGGCAGCAGCCGCCGCATACGGCGGCGCCGGAGATCCACGTGGACATCGGTGGGGGGAAGGTGGAGCACCGTGTGGTGGTGCACTCTGACAGTCACAGAGGCGTGTCAAGTGGGGAGAGTAAGGGGACTGTTAGTGGTGGGTGTGAAACGACGTCGTCGTTTGGGAGTGGGAGTGTCGTTTTGGGGGGTGGTGTTGGTGTTGGGCCTGAGGTGTCACACCTTGGCTGGGGGAGATGGTACACTTTGAGGGAGCTTGAGGCAGCAACTGGTGGGTTGTGTGAAGAGAATGTTATTGGTGAAGGTGGCTATGGGATTGTGTACCGTGGTGTGCTATCTGATGGTACCAAAGTTGCTGTCAAGAACCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTCAAAGTAGAGGTAGAAGCAATTGGTCGAGTGCGACACAAAAATCTTGTTAGGTTACTCGGCTACTGTGTTGAAGGGGCCTACAGGATGCTTGTGTATGAATATGTGGACAATGGCAATCTAGAACAGTGGCTGCATGGGGATGTTGGACCTGTTAGCCCTTTGACATGGGATATTCGCATGAACATCGTATTGGGAACAGCAAGAGGACTGGCCTATCTTCATGAGGGTCTTGAACCGAAGGTTGTCCACCGAGATGTGAAATCAAGTAACATACTCATTGATCGCCAATGGAACTCCAAGGTTTCTGATTTTGGACTAGCTAAGCTTTTGTGCTCAGAGAACAGTTATGTCACAACTCGAGTGATGGGGACATTTGGTTATGTCGCACCGGAGTATGCCTGCACTGGAATGCTAACCGAGAAGAGTGATGTTTATAGCTTTGGGATACTAATCATGGAGATTATTACTGGAAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAACCTAGTAGATTGGTTGAAGACTATGGTTGGGAATAGAAAATCCGAGGAAGTGGTTGATCCTAAGCTCCCCGAGATGCCATCGTCAAAGGCTCTTAAACGCGCTCTATTGATTGCCCTTCGGTGCGTAGATCCTGATGCAACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGACGACCTGTTATTCCACAATGATCAGAAAACTGGGGGAGAATCTTCCCGTTCCCATCACGGTTATGAACAAGAGCATAAGGACATAGATAAGAAGGGGACAGATGGAAGGATCACTGATCAAAGTGAAGATTATAGTGGTAGAAATCATCATCAGCCCAGTAGGAGATGA 1512 0.5086 MSIFDGAFMDTQLSKRTSIFGLRLWVVIGVLVGALIVFTLFLLSLCLTSRRHRRRAVAGKLAGATPSKEIQEIVHLPGPHMLRQQPPHTAAPEIHVDIGGGKVEHRVVVHSDSHRGVSSGESKGTVSGGCETTSSFGSGSVVLGGGVGVGPEVSHLGWGRWYTLRELEAATGGLCEENVIGEGGYGIVYRGVLSDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMNIVLGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPQGEVNLVDWLKTMVGNRKSEEVVDPKLPEMPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNDQKTGGESSRSHHGYEQEHKDIDKKGTDGRITDQSEDYSGRNHHQPSRR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0687 503 Pfam Protein kinase domain 177 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0687 503 ProSiteProfiles Protein kinase domain profile. 174 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0687 503 CDD STKc_IRAK 180 446 - -
Dod01g0687 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Dod01g0687 503 Gene3D Transferase(Phosphotransferase) domain 1 250 459 - -
Dod01g0687 503 SMART serkin_6 174 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0687 503 SUPERFAMILY Protein kinase-like (PK-like) 153 446 IPR011009 -
Dod01g0687 503 Gene3D Phosphorylase Kinase; domain 1 158 249 - -
Dod01g0687 503 PANTHER OS01G0323000 PROTEIN 1 495 - -
Dod01g0687 503 ProSitePatterns Protein kinases ATP-binding region signature. 180 202 IPR017441 GO:0005524
Dod01g0687 503 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 495 - -
Dod01g0687 503 MobiDBLite consensus disorder prediction 454 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0687 Dod-Chr1 11689791 11693748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0687 26 446 Trihelix Transcription Factor Family AT5G38560 40.281 5.23e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod01g0687 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0687 - - gmx:100800724 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0687 01 11689791 11693748 Dod07g1986 07 50647037 50651510 PCT