Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0686 ATGGCCACCACCACTCCTTCTCTTCTTCACTCATCAGGGTCCTCTTTTCTTGCTCAATTACGTGCCTTTCCATCATCATTCTCTTCGTCTTCTTCTGCACCGTTCCCTAATCGTGGAACCACCAGGCATGGAGGTGCAGTGGTGTCTGTGAAGGCCACTGGTCGTGGTGGTGCAGCAGTGCTGGTGGAGAAGTCCGAGGCAGAGAAGGTCCATAGGCTCAAATCAACTTACATTGAGAAAATAGTTCCCTTGCTCATGGAGGAGTTCTCTTACACCAACATTCACCAGGTGCCTAAAATTGAGAAGATTGTGGTTAACTGCGGTATTGGTGATGCCGCACAAAATGCTAAGGGTTTGGAAGCTGCAATGAATGATCTAGCTCAGATCACAGGGCAGAGACCGGTTAAGACTCGGGCTAGGGCTTCTGTTGCCACCTTCAAGATCAGGGAAGGTCAACCGCTTGGGATTGCCGTGACACTCAGAGGAAAGGTGATGTACTCATTCCTAGACCGAGTTATCAACTTGGGACTTCCTAGGACAAGAGATTTCCAAGGTTTGAACCCCAACAGCTTTGATGGACATGGGAATTACAGCATTGGCGTTAAGGACCAGAGTGTGTTCCCAGAGATCAGATATGATGCTGTTGGTAAGCCTAGGGGAATGGATATCTGCATCACCACAACGGCTAAAACCGATCAAGAAGCGCAGAAGTTGTTGGTTCTTATGGGCATGCCATTCAGAGAGGGAGGCGGTCCTGCCACTGCAATTCGCAAAAAGAAGCTGAAGTCTCATCATTTTGATGCAAAATCATCTAAGGGAAAAGGAAGGAAGTAA 834 0.482 MATTTPSLLHSSGSSFLAQLRAFPSSFSSSSSAPFPNRGTTRHGGAVVSVKATGRGGAAVLVEKSEAEKVHRLKSTYIEKIVPLLMEEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLAQITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKVMYSFLDRVINLGLPRTRDFQGLNPNSFDGHGNYSIGVKDQSVFPEIRYDAVGKPRGMDICITTTAKTDQEAQKLLVLMGMPFREGGGPATAIRKKKLKSHHFDAKSSKGKGRK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0686 277 SUPERFAMILY RL5-like 72 247 IPR022803 -
Dod01g0686 277 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 67 248 - -
Dod01g0686 277 Pfam ribosomal L5P family C-terminus 153 246 IPR031309 -
Dod01g0686 277 Pfam Ribosomal protein L5 93 149 IPR031310 -
Dod01g0686 277 Hamap 50S ribosomal protein L5 [rplE]. 70 248 IPR020930 GO:0003735|GO:0005840|GO:0006412
Dod01g0686 277 Gene3D - 64 248 IPR022803 -
Dod01g0686 277 ProSitePatterns Ribosomal protein L5 signature. 126 142 IPR020929 GO:0003735|GO:0005840|GO:0006412
Dod01g0686 277 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 67 248 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0686 99 226 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 28.906 9.60e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0686 K02931 - gmx:100800193 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0686 01 11676320 11680717 Dod01g0686 01 11676320 11680717 ECH