Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0680 ATGGAGCAAGATTGGGATCTCCATGCGGTGGTAAGAGGCTGCTGTTCCACTCGTACCTCTTCAACAGCCACAAGAAGAAGTGCCATTACTGCTACTGCATCATCTTCTGTGTCTTCTTCTTCTGGTTTTGGCACTTGTAATTACTTGCACCTGGAAGCTTCTTCTTCTTCCTCTTCCTCCTCTTGTGGTGGTGGTGGTGGTGGGTTTTCTTCTCTCTTTGATTGTGAGCAAGGAATTAGAAGCCAACAAGTTTTGTCACTTCCTTCTGCATACACCTTTGAAGCAAGGAGCCCCATTGAAGAGTTGCATGAGCTTTGCAAGCCTTTCTTCCCCAAATCACAGCCTCAACAACAGCATCATCAACAACAACAACAACAATCACTGCAAGCTTCTTCTTCTTCTTCTCCCTTGTCTTCATTCTCTTATACATCTGTTGCAGCAGCACCCAAACCTGTTCAGACACAAGAGAAGCAACAACAGCAACAGCAACAGCGTAACAAGCATCCTCACCAAGGCGGTTCTGTCACAACCCCACGATCTAAAAGAAGGAAGAACCAGCTTAAGAGAGTTTGTCAAGTGCCAGTTGAGAATCTCTCTTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATAAAAGGGTCACCATATCCAAGGGGATACTACAGATGTAGCAGCTCAAAAGGTTGCTTAGCAAGGAAACAGGTTGAGAGGAACAGATCAGACCCAACAATGTTCATAGTGACATACACAGCTGAACACAACCACCCTGCTCCCACTCACAGGAACTCCCTTGCTGGCTCCACACGCCAGAAGCCACTGAGACCGCAAACAGCAGCTGCCACCACCACAACCACTGGTGGAGAAGAATCTGAAAAGGCCTTGGCAAAACCAACATCTCCTGTTACACCAGTTGTAGAAGAAGAGGCTCCACCACAAGGGGAAAAGTCATCAGAGAGCAAGGAAGAGAAGGAGGATGTGATGGATGATGATGAGGTGGAGGGAGATGAGTTTGTGTTGTCTGATATGGTGCTGCCAGATGATTTCTTTGAGAGCTTGGATGAATTGGGTCAACTCACTGGCACTGGAGATTGCTTCACTGATCCCTTTTCAGCTATGGCACTGCCTTGCTTGGGTGGCCAATAG 1149 0.4726 MEQDWDLHAVVRGCCSTRTSSTATRRSAITATASSSVSSSSGFGTCNYLHLEASSSSSSSSCGGGGGGFSSLFDCEQGIRSQQVLSLPSAYTFEARSPIEELHELCKPFFPKSQPQQQHHQQQQQQSLQASSSSSPLSSFSYTSVAAAPKPVQTQEKQQQQQQQRNKHPHQGGSVTTPRSKRRKNQLKRVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLRPQTAAATTTTTGGEESEKALAKPTSPVTPVVEEEAPPQGEKSSESKEEKEDVMDDDEVEGDEFVLSDMVLPDDFFESLDELGQLTGTGDCFTDPFSAMALPCLGGQ* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0680 382 ProSiteProfiles WRKY domain profile. 194 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0680 382 SMART WRKY_cls 199 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0680 382 Gene3D WRKY domain 183 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0680 382 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 382 - -
Dod01g0680 382 MobiDBLite consensus disorder prediction 257 291 - -
Dod01g0680 382 MobiDBLite consensus disorder prediction 255 337 - -
Dod01g0680 382 Pfam WRKY DNA -binding domain 201 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0680 382 MobiDBLite consensus disorder prediction 111 190 - -
Dod01g0680 382 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 382 IPR044810 GO:0003700
Dod01g0680 382 MobiDBLite consensus disorder prediction 111 180 - -
Dod01g0680 382 SUPERFAMILY WRKY DNA-binding domain 197 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0680 Dod-Chr1 11506999 11509270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0680 135 368 WRKY Transcription Factor Family AT4G01250 52.564 2.17e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g0680 WRKY 3.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0680 K13425 - gmx:100798084 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0680 01 11506999 11509270 Dod07g1993 07 50793502 50795634 PCT