Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0677 ATGGACAGCCAAGACCCACCAAACCCATCACCACCACCATTATTACTGCCACCCCAAAACAACAACAACAACAACAATCTTACCTTCCCCTTCACACCCTCCATGCTTCAAAACCCTTTGCCTTTGGAACCCCATCAAGCTCAAGCTAGCCTTGGCGACATAAATGACTATTGGGGTAACATTATTTTCTCTTCTGGCCAGAACAGCTTGCTTTGTGATGCCACCAAGGAAATTACAACAATGGAATGCGCTTCTTCTTCCTCTTCTTCTTTGATGGCTGAAAATAATATGATTGGAACTCGTGAAGAAGGAAATGGAGAAAAGGAGAAGAGAAAGGGTGGAAGAGTGAAGAAGGCAACACGAGTACCAAGGTTTGCGTTTCAGACGAGGAGTGCTGATGATATCTTGGATGATGGTTATCGCTGGAGGAAATATGGCCAGAAAGCAGTGAAGAATAGCACATATCCAAGGAGCTACTACCGTTGCACGCATCACACATGCAATGTGAAGAAACAGGTGCAGAGGCTATCCAAAGACACAAGCATTGTGGTGACTACTTACGAGGGAATTCACAATCATCCATGCGAGAAGCTGATGGAAACACTGACCCCTCTTCTGAAGCAAATACAGTTTCTTGCTAGCATCTAA 648 0.4475 MDSQDPPNPSPPPLLLPPQNNNNNNNLTFPFTPSMLQNPLPLEPHQAQASLGDINDYWGNIIFSSGQNSLLCDATKEITTMECASSSSSSLMAENNMIGTREEGNGEKEKRKGGRVKKATRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0677 215 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 211 IPR044810 GO:0003700
Dod01g0677 215 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 85 211 - -
Dod01g0677 215 MobiDBLite consensus disorder prediction 1 41 - -
Dod01g0677 215 Gene3D WRKY domain 121 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0677 215 SUPERFAMILY WRKY DNA-binding domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0677 215 ProSiteProfiles WRKY domain profile. 131 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0677 215 Pfam WRKY DNA -binding domain 137 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0677 215 MobiDBLite consensus disorder prediction 98 118 - -
Dod01g0677 215 SMART WRKY_cls 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0677 215 MobiDBLite consensus disorder prediction 19 41 - -
Dod01g0677 215 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0677 Dod-Chr1 11472617 11478542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0677 91 215 WRKY Transcription Factor Family AT5G41570 68.000 2.24e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g0677 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0677 - - gmx:100127398 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0677 01 11472617 11478542 Dod07g1999 07 50827962 50831176 PCT