Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0673 ATGGAGAGAGAAACAACAAACACAACCCTCCCTTCCCTCCTTCTTCTTCTTCTTCTTCTTCTTCACCCCTTCCTCTTTCTCTTCCTCTTCTTCTTCCCTCTACCTCTCCCTTTCAATCCAATGTCCACTCCACCTCCTTCTCCCTCCTCCTCATACCTCTCCAAAATAGGCCTTGGCTATGGAATAGCCATAGCCCTCGCCTTCCTCGTCCTCCTCTCCACCATCATCCTCACCTCCTACCTCTGCTGTAACCGTAACCGTAACCGTCGTAACCGTCCCAACAACCCCTCCAACAACAACAACAACAACAACCCCTCGGACGGCGTCGTTCTGCCGCGGATAATCTTCGTTGCGGAGGACGAGGACGACGAACGAGACAACGCTCCAGCGGTTGGGTTGGACCAGAACGTGATAAACTCGTACCCGAGGTTCCAGTTCAGCAAGGAAGAAAATGGTGGTGTTGGCCAGAGCAACACGTGTTCGATATGTTTGTGCGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGCCGACACTACTTCCACCTCTGCTGCCTCGACTCGTGGCTCAGGCTCAACGGCTCCTGCCCCGTTTGTCGGAACTCGCCGCTACCGACGCCGCTCTCTACGCCGCTGCAGGAGGTGGTGCCGCTCTCTCAGTATGCTGCTGATAGGAGGATAAGGAGGTGA 696 0.5474 MERETTNTTLPSLLLLLLLLLHPFLFLFLFFFPLPLPFNPMSTPPPSPSSSYLSKIGLGYGIAIALAFLVLLSTIILTSYLCCNRNRNRRNRPNNPSNNNNNNNPSDGVVLPRIIFVAEDEDDERDNAPAVGLDQNVINSYPRFQFSKEENGGVGQSNTCSICLCEYKDSEMLRMMPECRHYFHLCCLDSWLRLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRIRR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0673 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 206 IPR013083 -
Dod01g0673 231 Pfam Ring finger domain 158 202 IPR001841 -
Dod01g0673 231 PANTHER RING-H2 FINGER PROTEIN ATL67 49 229 IPR044289 GO:0016567|GO:0016740
Dod01g0673 231 SUPERFAMILY RING/U-box 159 207 - -
Dod01g0673 231 PANTHER RING-H2 FINGER PROTEIN ATL67 49 229 - -
Dod01g0673 231 SMART ring_2 160 201 IPR001841 -
Dod01g0673 231 CDD RING-H2_PA-TM-RING 159 202 - -
Dod01g0673 231 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0673 Dod-Chr1 11408560 11409858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0673 47 221 C3H Transcription Factor Family AT5G07040 41.143 6.19e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0673 - - lja:Lj1g3v2807930.1 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0673 01 11408560 11409858 Dod07g2003 07 50855963 50856535 PCT