Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0668 ATGGTCTTGTCTTCTCTAAACATGGAGCTTCACTACGTTTACATTCTCTTCACAATCCTTCTCCTGTGTTTGTTTCCTCAATCACTCCATTGCCAACAGGTATTCCTCAACAACACTGTCTATGACTGCTCTAGCAACCCTTCTACACCAAAAGGGTACCTTTGCAATGGCCTTCAAAATTCATGCACTTCCTTCTTGGTTTTCATGTCAAAACCTCCCTATGACAGCCCTGAAAGCATTGCCTACCTTCTTGGATCAGAAGAATCTACCATAGCCTCAATCAACAAGATCTCAAACAATGACAAGATTCCTTCCAATGAACCTGTCATTGTTCCTGTGTCTTGCTCATGTTCTGGAAATATCTACCAGCATAACACTCCTTACACTGTCAAGAAGAATGACACCTACTATCAATTGGTAAACAAAACTTACCAAGGCCTCACCACATGCCAGGCACTGATGGGTCAGAATTACTATGCACAAGATAACATTGCAATTGGTGCTGAGCTCACAGTTCCTATGCTATGTGCCTGTCCCACCGCAAACCAGACAGTGAGAGGGGTCACCTCCTTGCTGGTTTACTCACTGAGAAATGGCGACACGGTCATTTCCATAGGAGCGGCTTATGGTGTTGATGAACAAAGTATTCTGGATGCCAATGAATTGCCAGAGACACCAAATTCAAACACCAGCTTGAACCTTATATCCAGCACGCCTATGTTAGTTCCACTGAGAGGCAAGAGTTGCAAAGAGGACCCTGAGAGTTTCTATTGTACCTGTTCCCAGGGACAAGTTGCATATGGAAGCGTTAAGGGGGTCCAGTGTGAAGAATCTAATGGTAAAAAAATTCCTGCCAAATTGGTTGCTGCATTAGGAATTGGCATTGGTGTCGCCTTTCTTTGTTTGTTTCTTCTGAATTACTGGCTATATAAATGTATAAAGAAAAAGAGAGAAAATATTCGTAAGGAAAAACTATTCAAGCAAAACGGTGGCTACTTGCTACAAGAGAAAGTATCATCTTATGCAAATGGACAGAAGACAAAGCTTTTTACGGCTGAGGAGCTTAAAAGAGCAACAGATAACTACAACCAGAGTAGGTTTCTTGGTCAGGGTGGCTATGGCATGGTCTATAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTGAAGAAATCAAAAGAGGTGGATAGGAACCAGATACAGACTTTTGTCAATGAAGTGGTCATTCTATCCCAGATTAACCACAGGAACATTGTTAAACTCTTGGGATGTTGTCTTGAGACAGAATCTCCATTACTAGTTTGTGAATTTATTCCCAATGGAACACTTTCTAACCATATTCATGGGAAAGAGCATGAGTCATCGCTTTCATGGGACAATCGCCTTCGGATTGCATGTGAGGTTGCTGGAGCAGTAGCATATATGCATTCTGCGGCTTCTGTTCCTATCTTCCACAGAGACATCAAACCTTCTAACATACTACTGGACAGCAACCACAGTGCTAAGGTGTCTGATTTTGGGACATCAAAATCAGTCCCACTAGATAATACTCACTTGACCACAGCTGTAAGAGGAACTTTTGGGTACATGGATCCTGAGTATTTCCAGTCCAGTCAATATACAGATAGAAGTGATGTTTACAGTTTTGGGGTTGTGCTTGTAGAACTCATAACTGGGAGAAAGCCTATTTCATTTCATGAAAAAGATGAGGGCCAGAATCTGATTGCAGAATTCATTTCAGTGAAGAAGGAGAACCAACTTTCCGACATTATAGATGCCAGAGTGGTTAAGGAAGCAAGGAAAGATGACATTCCTGCCATGGCAGATCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAGCTAGAAGCACTAAGAATGGTACAGAGTAACTTTCAGATCAACCATGATCACGAGTCACCAAACGATAGCATATTGCTAAATGACACCACCAGTGTAACAGTTACTGGAGAGGAAAGCATTTCACTGTCTCTACAAATTGAGTCGTCATCCTTCTAA 2049 0.4187 MVLSSLNMELHYVYILFTILLLCLFPQSLHCQQVFLNNTVYDCSSNPSTPKGYLCNGLQNSCTSFLVFMSKPPYDSPESIAYLLGSEESTIASINKISNNDKIPSNEPVIVPVSCSCSGNIYQHNTPYTVKKNDTYYQLVNKTYQGLTTCQALMGQNYYAQDNIAIGAELTVPMLCACPTANQTVRGVTSLLVYSLRNGDTVISIGAAYGVDEQSILDANELPETPNSNTSLNLISSTPMLVPLRGKSCKEDPESFYCTCSQGQVAYGSVKGVQCEESNGKKIPAKLVAALGIGIGVAFLCLFLLNYWLYKCIKKKRENIRKEKLFKQNGGYLLQEKVSSYANGQKTKLFTAEELKRATDNYNQSRFLGQGGYGMVYKGMLPDGTIVAVKKSKEVDRNQIQTFVNEVVILSQINHRNIVKLLGCCLETESPLLVCEFIPNGTLSNHIHGKEHESSLSWDNRLRIACEVAGAVAYMHSAASVPIFHRDIKPSNILLDSNHSAKVSDFGTSKSVPLDNTHLTTAVRGTFGYMDPEYFQSSQYTDRSDVYSFGVVLVELITGRKPISFHEKDEGQNLIAEFISVKKENQLSDIIDARVVKEARKDDIPAMADLAMRCLRLNGKKRPTMKEVSAELEALRMVQSNFQINHDHESPNDSILLNDTTSVTVTGEESISLSLQIESSSF* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0668 682 Pfam LysM domain 128 173 IPR018392 -
Dod01g0668 682 Pfam LysM domain 194 222 IPR018392 -
Dod01g0668 682 Gene3D Transferase(Phosphotransferase) domain 1 438 656 - -
Dod01g0668 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Dod01g0668 682 SMART LysM_2 127 173 IPR018392 -
Dod01g0668 682 SMART LysM_2 193 243 IPR018392 -
Dod01g0668 682 SMART LysM_2 73 112 IPR018392 -
Dod01g0668 682 Gene3D Phosphorylase Kinase; domain 1 342 437 - -
Dod01g0668 682 ProSiteProfiles Protein kinase domain profile. 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0668 682 SUPERFAMILY Protein kinase-like (PK-like) 347 632 IPR011009 -
Dod01g0668 682 PANTHER LYSM TYPE RECEPTOR KINASE 31 674 - -
Dod01g0668 682 SMART serkin_6 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0668 682 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 674 IPR045274 GO:0007166
Dod01g0668 682 CDD STKc_IRAK 368 635 - -
Dod01g0668 682 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Dod01g0668 682 Pfam Protein kinase domain 362 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0668 Dod-Chr1 11342053 11345111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0668 284 649 Receptor kinase-like Gene Family AT1G16120 56.676 5.90e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod01g0668 Pkinase 3.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0668 - - gmx:100795455 993.416