Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0655 ATGGTTTCCTTGTCAACCACCAACCCCTTGTTCCCCCTCACCACCCAAAACGCTGCGTCTCGTTCTTCTCCTTCTTCCAGATTCGCAGCTTCAAGCAAGTTCAATTCCTTCTACAACAACAACAACAATAATAATAATAATAAGGATCATAGAAAGGTTGTTTGCGCTTGCGTAGCTCCTCCACGAAACTTCAAGAGTGAGGATTCTTCCGCCCTCAAATTCAATGGTTCATCCAAATCGGAGCAATTGAGCACGGTGCGGGAACACGAGGGGGATTCTGATGTTCTAATTGAGTGTAGAGAAGTCTACAAGTCTTTTGGGGAGAAGAAAATCCTAAATGGTGTCAGCTTCAAGATCAGACATGGTGAAGCAGTTGGAATAATTGGTCCCTCTGGGACCGGAAAATCCACAGTTTTAAAGATTATTGCAGGACTTCTTGCTCCAGACAAGGGGGAAGTTTATATTCAAGGTAGAAAGAGAGTTGGTTTGATAAGCGATGATGATATATCTGGTCTTCGCATTGGATTAGTGTTCCAAAGTGCAGCACTCTTTGATTCTTTGACTGTCCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGTCTGAGGACCAGATATCAGAGATTGTCAAGGAAACCTTGGCTGCAGTTGGACTGAAGGGAGTTGAAGATCGGCTGCCTTCTGAGTTATCGGGTGGGATGAAAAAACGAGTTGCTTTAGCTCGTTCTATTATTTATGACAACACAAAGGATTCAATTGAGCCAGAGGTACTCTTGTATGATGAACCAACTGCTGGCCTTGATCCCATTGCATCTACTGTTGTTGAGGATCTGATTCGCTCAATGCACATTAAAGGACGAGATGCACGTGGGAAGCCTGGTAACATTGCATCTTATGTGGTGGTCACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGGTTATTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCAGGAATTTACAACATCAACGAATCCAATTGTCCAGCAGGTAAGTCATAACGTATGGAGTTGTTTAAGATTTCCTTTGTTGGGGAGTCTTTCTTTATCTAGGGACAATATGTAG 1110 0.4261 MVSLSTTNPLFPLTTQNAASRSSPSSRFAASSKFNSFYNNNNNNNNNKDHRKVVCACVAPPRNFKSEDSSALKFNGSSKSEQLSTVREHEGDSDVLIECREVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIQGRKRVGLISDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISEIVKETLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDNTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSMHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTQEFTTSTNPIVQQVSHNVWSCLRFPLLGSLSLSRDNM* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0655 369 MobiDBLite consensus disorder prediction 66 87 - -
Dod01g0655 369 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g0655 369 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524
Dod01g0655 369 Gene3D - 83 350 IPR027417 -
Dod01g0655 369 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 1 347 - -
Dod01g0655 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 338 IPR027417 -
Dod01g0655 369 SMART AAA_5 121 325 IPR003593 -
Dod01g0655 369 CDD ABC_Org_Solvent_Resistant 97 345 - -
Dod01g0655 369 Pfam ABC transporter 112 267 IPR003439 GO:0005524
Dod01g0655 369 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 97 348 IPR003439 GO:0005524
Dod01g0655 369 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 1 347 - -
Dod01g0655 369 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0655 Dod-Chr1 11215718 11220971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0655 103 330 Calmodulin-binding Proteins AT2G36910 28.870 4.94e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0655 - - adu:107486109 578.17