Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0635 ATGAGCTCGAAGGAGAGACCCACTCTTGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCGGCGCCGCTGGACCCTGCAGCATTTGCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTATTGTTAAGAGCATTGAATCCTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTCGAGGTTGTTTTCACTGGGGGTCGTACACAACCGGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCATACTCTATATTAGAGTGTGAGCCAACGCGTGAAGTCATTTTACCATCTGTAATCTACATACAAAAGATTTTGCGGCGAAGGCCATTTCTCATCAAGAACCTTGAAAATGTTATGCAAAAGTTCCTTCAGTCCTTGGAGCTGTTTGAGGAAAATGAGAGGAAGAAGTTGGCAATCTTCACAGCACTTGCATTCTCTCAGAAGCTATCTGGTCTTCCACCAGAGACTGTGTTCCAACCACTTCTTAAAGACAACCTTGTGGCCAAAGGGCTAGTTCTGTCGTTTATAACTGAGTTCTTTAAGGTGTATCTGATTGACAACAGCCTTGATGATCTTATTTCAATTCTGAAACGCGGAAAAGTAGAGGATAATCTCTTGGACTTTTTCCCCCCTGCAAAAAGATCTAATGAGTCTTTCTCTGAGCATTTCAGCAAGGAAGGATTGGTGGCCTTGGTGGAGTACAATGATAAGAAAATATTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTGACAACTCAGATAACAGAGGAGGTTGATATATCTGAGGTAATTGAAAATGTGAAGGTGCGAGTGAGAGATGCTAAATTGCCTGACATTGAGGTTGTCCGCATCTTGTGGGACGTTTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATTCAGCACTGCGCCAGGTAAAAACCTGGGCAGGATTGTTGAATACCTTCTGCACCAGTGGGAAACTAGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAACTGATGAAACTGTTCCCTGAGATTATTAGATCTCTCTATGAGCAGGATGTGCTGGCTGAAGATACCATCCTTCATTGGTTCCGGAAAGGAACAAATACCAAGGGCAGGCAAACCTTTGTGAAGGCACTGGAACAATTTGTGAATTGGCTGGAGGAGGCAGAAGAGGAGGAATAA 1236 0.4417 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGDLELIVKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSILECEPTREVILPSVIYIQKILRRRPFLIKNLENVMQKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITEFFKVYLIDNSLDDLISILKRGKVEDNLLDFFPPAKRSNESFSEHFSKEGLVALVEYNDKKIFEVKLKEMKSALTTQITEEVDISEVIENVKVRVRDAKLPDIEVVRILWDVLMDAVQWSGKNQQQNANSALRQVKTWAGLLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYEQDVLAEDTILHWFRKGTNTKGRQTFVKALEQFVNWLEEAEEEE* 412
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0635 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Dod01g0635 411 CDD W2_eIF5C_like 216 405 IPR043510 -
Dod01g0635 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Dod01g0635 411 Gene3D - 242 411 - -
Dod01g0635 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
Dod01g0635 411 SUPERFAMILY ARM repeat 252 408 IPR016024 -
Dod01g0635 411 SMART 542_3 325 410 IPR003307 GO:0005515
Dod01g0635 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Dod01g0635 411 Coils Coil 121 141 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod01g0635 Dod-Chr1 11008230 11013018 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0635 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 1.18e-08 55.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0635 - - qlo:115991605 758.444