Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0633 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCACACCCAAACTCCCCATCTGGATTCAAGAAGCGCAGGAACTCCAAAAAGAGGTTTGGATCCAGAAGCTCTTCCTTTGAGTATTGGAGGAATGAGCCACTCCATAGGATCCCTGGCAGGATCTTCCTCAATGGGTCTAGCCAAGTTGCTTCCTTGTTCACCCAACAAGGAAAGAAAGGCACCAATCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGACGTGATACAATTTTCTGTGGAGTTTTTGATGGCCATGGTCCATTTGGTCACATGGTTGCGAAAAAAGTGAGGGACTCCCTTCCTCTAAGACTGAATACCCATTGGGAACTTAATGTATCTGGTGAGGATGTCCTCAAGGAGATTAGCATAAATACTGCAGGAAGCATGAACTCGGAAGAGGGTGCTTTTGTATCTGCTGACGAGGAATCCAGGGCATCCGTTGATGCTGAAGAAATGGAAAAACACCCAGAAATCTTTCAAACACTTAAAGAGACCTTTCTGAAGGCATTCAAGGTTATGGATAGAGAACTGAAGACGCACCGCAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACACTGGTGAAACAGGGTCGTGATCTTGTTATTGGAAATGTTGGTGACTCCAGAGCTGTGCTTGGTACAAGAGAGAGAGATAATTCTCTTGTTGCAGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCAGAGAGGATTCGCAAATTCAAAGGACGTGTTTTTGCCCTTCAGGATGAGCCTGAAGTTGCTCGAGTCTGGTTGCCAAATAATGATTCCCCCGGCCTTGCCATGGCCCGTGCATTTGGAGACTTTTGTCTTAAAGATTTTGGTCTGATATCTGTTCCAGAGGTATCATACCGGCGTCTCACCGAGAAGGATGAGTTTGTTGTCCTGGCAACAGATGGGATTTGGGATGTGCTCTCAAACCAAGAAGTGGTAGACGTCATAGCAGCAGCACCGGCACGTTCCTCAGCAGCTCGAGCGCTGGTCGAGTCAGCAGTTAGAGCTTGGAGATACAAATATCCAACTTCCAAGGTGGATGATTGTGCAGTGGTTTGCCTCTTTCTGGACCAAGACTCGCACAAAGTGTCTAGTGCTTCCTATGCCAAGTCCAAAGAGCAGCCGAGCTCAGGGATTGAAGCCAACGGCGGGGGCACCGAGGGGGAAGACGTTTCCGGACCGACCGGTCTGCAAAGGTCAGGAACTTGCAGGGAAAGCAATGGCGAATCCAATGTCGAAAGCAATGAGGAAGTGTACAAGGATGGTGAGATAGATGCTGAAGAGTGGTCTGCACTTGAAGGGGTGTCTCGTGTGAACACATTATTGAATCTCCCAAGATTTGTCCCAGGCAAAGAAGAAGACAAGGCTACTGCAGCAGGCATCAGAAAACGCAAATGA 1467 0.4806 MGSCFSAESRSPHPNSPSGFKKRRNSKKRFGSRSSSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRRDTIFCGVFDGHGPFGHMVAKKVRDSLPLRLNTHWELNVSGEDVLKEISINTAGSMNSEEGAFVSADEESRASVDAEEMEKHPEIFQTLKETFLKAFKVMDRELKTHRSIDCFCSGTTAVTLVKQGRDLVIGNVGDSRAVLGTRERDNSLVAVQLTVDLKPNLPAEAERIRKFKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNQEVVDVIAAAPARSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDQDSHKVSSASYAKSKEQPSSGIEANGGGTEGEDVSGPTGLQRSGTCRESNGESNVESNEEVYKDGEIDAEEWSALEGVSRVNTLLNLPRFVPGKEEDKATAAGIRKRK* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0633 488 Pfam Protein phosphatase 2C 173 357 IPR001932 -
Dod01g0633 488 MobiDBLite consensus disorder prediction 389 444 - -
Dod01g0633 488 CDD PP2Cc 59 379 IPR001932 -
Dod01g0633 488 SUPERFAMILY PP2C-like 53 380 IPR036457 -
Dod01g0633 488 SMART PP2C_4 51 377 IPR001932 -
Dod01g0633 488 MobiDBLite consensus disorder prediction 1 19 - -
Dod01g0633 488 MobiDBLite consensus disorder prediction 416 432 - -
Dod01g0633 488 PANTHER ALPHABET, ISOFORM E-RELATED 1 466 - -
Dod01g0633 488 Gene3D - 55 382 IPR036457 -
Dod01g0633 488 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Dod01g0633 488 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 466 - -
Dod01g0633 488 MobiDBLite consensus disorder prediction 389 404 - -
Dod01g0633 488 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0633 Dod-Chr1 10973452 10978025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0633 1 474 PP2C-type Phosphatase Gene Family AT3G02750 63.138 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0633 - - gmx:100790373 783.097