Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0632 ATGGACATGACCAACCCCAACTTGTTACTACTGAAGTATTGTGTTGTATCATCACTATGCATGCTTTTGTTGGCTTGTTGGACTTTTGTTGAAGCTGCCCCTGCAGCCTCTCTTGTCACACAACTCCCTGGCTTTCATGGAAATCTCCCATCCAAGCATTACTCAGGATATGTAAGTGTTGATGGAGATGCTGGGAGTGGGAAGAACCTGTTCTACTACTTTGTTACTTCAGAGAGAAATCCAGGGAAGGATGCACTTGTTCTATGGCTGAATGGTGGACCTGGTTGCTCCAGCTTTGATGGCTTTGTTTATGAGCATGGACCATTCAACTTTGAGGCTGCAAAAACAAAAGGGAATCTGCCCACATTGCACGTCAATCCTTACAGCTGGTCTAAGGTTTCCAACATTATATATTTGGACTCTCCCGCGGGTGTTGGCCTCTCTTACTCCAAGAATTCAAGCAAATACGTTACTGGGGATCTGCAAACTGCGTCTGACACCCATGCTTTCCTCTTAAAGTGGCTTGAGCAATATCCGGAATTCCTTGCTAATCCATTTTATATTGCTGGGGAATCTTACGCTGGAATTTATGTGCCCACTCTAGCTTTTGAAGTAGTTAAAGGAATCCAGAGTGGTAGAAAACCCGTGATCAATTTTAAGGGTTATATGGTCGGCAATGGTGTCACGGACGAGATCATTGACGGCAATGCTCTTCTCCCATTTGTGCACGGGATGGGCCTCATATCCGACAGTATCTATGAGGATGTAGAAGCTTCTTGTAAAGGAAACTACTACAAAGCTTACAGCTCTGAGCAGGAAGATGACACATGCAATAAAAGTATCGAAAAAGTTGATAGGGCTATTGAGGGGCTTAACGTGTACGATATACTAGAGCCATGCTACCATGAACCTGATGCTGCAGCACTCAAAGCTTCAAATGGAAGCTTGCCACTTAGTTTCCAGCAATTAGGGGTTACGGAGAAGCCTCTCAAAGTGAGAAAGAGGATGTTCGGTCGAGCTTGGCCCTTTAGAGCACCAGTCAAAGATGGCATTGTTCCATTGTGGCCCCAACTGATGGCTAAAACAAGGCATATTGACTGTGTTAGTGATGAAGTTGCAAGTTCATGGCTCAACAATGATGCAGTCAGGAAAGCCATTCACGCTGACGAGGAAAGTGTGGCGGGCCCGTGGGAATTATGCACTGGAAGGATAGAATACCATCACAATGCTGGAAGCATGATTCCTTACCACAAGAACCTAACAATGCAACGCTATCAAGCACTTATTTTCAGTGGAGATCATGATATGTGCGTCCCATTTACCGGAAGTGAAGCGTGGACCAGATCTCTGGGATATAAGATTGTGGATGAATGGAGACCATGGAACTCTAATGGCCAAATTGCTGGTTACTTACAAGGGTACGAGAACAATCTTGTCTTTCTCACAGTCAAGGGAGCTGGGCACACAGTGCCAGAGTATAAGCCGCGTGAGGCACTGGATTTTTACAGCCGTTGGTTGGAAGGAAGACCAATATAA 1536 0.4525 MDMTNPNLLLLKYCVVSSLCMLLLACWTFVEAAPAASLVTQLPGFHGNLPSKHYSGYVSVDGDAGSGKNLFYYFVTSERNPGKDALVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGNLPTLHVNPYSWSKVSNIIYLDSPAGVGLSYSKNSSKYVTGDLQTASDTHAFLLKWLEQYPEFLANPFYIAGESYAGIYVPTLAFEVVKGIQSGRKPVINFKGYMVGNGVTDEIIDGNALLPFVHGMGLISDSIYEDVEASCKGNYYKAYSSEQEDDTCNKSIEKVDRAIEGLNVYDILEPCYHEPDAAALKASNGSLPLSFQQLGVTEKPLKVRKRMFGRAWPFRAPVKDGIVPLWPQLMAKTRHIDCVSDEVASSWLNNDAVRKAIHADEESVAGPWELCTGRIEYHHNAGSMIPYHKNLTMQRYQALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWNSNGQIAGYLQGYENNLVFLTVKGAGHTVPEYKPREALDFYSRWLEGRPI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0632 511 ProSitePatterns Serine carboxypeptidases, histidine active site. 478 495 IPR033124 GO:0004185
Dod01g0632 511 Gene3D alpha/beta hydrolase 31 336 IPR029058 -
Dod01g0632 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 478 491 IPR001563 GO:0004185|GO:0006508
Dod01g0632 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Dod01g0632 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Dod01g0632 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Dod01g0632 511 Gene3D - 364 511 - -
Dod01g0632 511 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Dod01g0632 511 PANTHER CARBOXYPEPTIDASE 22 510 - -
Dod01g0632 511 SUPERFAMILY alpha/beta-Hydrolases 39 510 IPR029058 -
Dod01g0632 511 Pfam Serine carboxypeptidase 43 508 IPR001563 GO:0004185|GO:0006508
Dod01g0632 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 510 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0632 Dod-Chr1 10955942 10963991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0632 372 511 Calmodulin-binding Proteins AT2G22960 47.143 9.13e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0632 K16296 - gmx:100790895 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0632 01 10955942 10963991 Dod07g2004 07 50863392 50866103 PCT