Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0606 ATGGAGAAGGTGAGTTTTGTGAAGAATGGTGAGCTAAGATTGCCACCAGGGTTCCGTTTCCACCCAACTGATGAGGAACTTGTTGTTCAATACTTGAAGCGCAAGGTCTTCTCCTGCCCCTTGCCTGCCTCCTTCATACCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGGTACTTCTTCAGCACAAAGGAGGCAAAGTACCCTAATGGCAACCGATCCAACAGAGCTACAAGCTCAGGTTACTGGAAGGCCACTGGCCTGGACAAGCAAATCTCAACCCCAAAAGGGCACCAACTTGTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGCAAGCCACCTCATGGTTCAAGAACCGATTGGATCATGCACGAGTATCGCCTCCTCAACACTACTTGCTCCCACTCTCAGAGCCAAGCGGTTCCAATGGAAAATTGGGTTCTGTGCCGCATATTTTTGAAGAGGAGGGTGGCCAAGAATGTGGAGGAGACCGAGGCATTAAGCATTAGCCGCAAGGTGAGGAACACAAAGGTTGTTTTCTATGACTTCTTGGCACAGAACAGGGCTGATTTGAACCGTGCACCTCCTCCTGCTTCATCATCCTCGGCAATAAGTGGAATCACTGAGGTCTCAACAAACAACAACAACAACAACAACAATGAATCGGATGAACATGAAGAGAGCAGTAGCTGCAACAGCTTCCCTTATTTCAGGAGAAAACACCACCACCACCTACAAGGAGAACCTTAA 780 0.4808 MEKVSFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSCPLPASFIPEVDVCKSDPWDLPGDLEQERYFFSTKEAKYPNGNRSNRATSSGYWKATGLDKQISTPKGHQLVGMKKTLVFYKGKPPHGSRTDWIMHEYRLLNTTCSHSQSQAVPMENWVLCRIFLKRRVAKNVEETEALSISRKVRNTKVVFYDFLAQNRADLNRAPPPASSSSAISGITEVSTNNNNNNNNESDEHEESSSCNSFPYFRRKHHHHLQGEP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0606 259 MobiDBLite consensus disorder prediction 203 229 - -
Dod01g0606 259 MobiDBLite consensus disorder prediction 201 243 - -
Dod01g0606 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 1 250 - -
Dod01g0606 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 250 - -
Dod01g0606 259 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Dod01g0606 259 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Dod01g0606 259 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
Dod01g0606 259 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0606 Dod-Chr1 10724902 10727195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0606 1 244 NAC Transcription Factor Family AT5G13180 58.491 3.62e-101 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g0606 NAM 8.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0606 - - aip:107635778 370.548