Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0603 ATGGATGGGATGATGAGAAAGAGGATGAGCATGAGCGGATCAAAAGGGAAGAAAGGGCTAATAACAAAAACATGGGAGCGATGCAAGTCCATAGGAAGAGGCCGCAAGAGTTCTTCATCATCATCAAAGGCAATTATTGGTTCTCATCCTGTGATGACCACAAGGAGCAGATCCTGGCCTAGCCATGAGTACCACAGTGATGCTACTACAGTGGACCATCATCAAGAAAAGAAAGGGAAGAGGAATAAATGGAGGGTTGCTCCAGAAGGTTGTTTCACGGTGTATGTTGGACCACAAATGCAAAGGTTCGTGATCAAGACCGAGTATGCAAACCACCCTTTGTTCAAGATGTTGCTTGAAGAAGCCGAGTCTGAATACGGTTATAGCAGCCAAGGACCTTTGGCACTCCCTTGCCACGTTGACATCTTCTACAAGGTTCTCATGGAGATGGATCAAGAAGGAAATAGCACTGAACAAGCTCGTCAAGGATGTGCTTTTGGGAAGCGCACTCGATCCTACCATCTTCTTAGCCCTTCCAAAATGGCTGCCATAAACCACTTCTAA 564 0.461 MDGMMRKRMSMSGSKGKKGLITKTWERCKSIGRGRKSSSSSSKAIIGSHPVMTTRSRSWPSHEYHSDATTVDHHQEKKGKRNKWRVAPEGCFTVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSSQGPLALPCHVDIFYKVLMEMDQEGNSTEQARQGCAFGKRTRSYHLLSPSKMAAINHF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0603 187 MobiDBLite consensus disorder prediction 50 82 - -
Dod01g0603 187 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 165 IPR003676 GO:0009733
Dod01g0603 187 Pfam Auxin responsive protein 63 147 IPR003676 GO:0009733
Dod01g0603 187 MobiDBLite consensus disorder prediction 60 82 - -
Dod01g0603 187 PANTHER SMALL AUXIN-UP RNA-RELATED 16 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0603 Dod-Chr1 10664061 10665564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0603 87 152 Calmodulin-binding Proteins AT5G20810 46.970 1.96e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0603 K14488 - fve:101294039 185.267