Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0602 ATGACCACAAGGAGCAGATCCTGGCCTAGCCGTGAGTACCACAGTGATGCTACTACAGTGGACCATCATCAAGAGAAGAAAGGGAAGAGGAATAAATGGAGGGTTGCTCCAGAAGGTTGTTTCACGGTGCATGTTGGACCACAAATGCAAAGGTTCGTGATCAAGACCGAGTATGCAAACCACCCTTTGTTCAAGATGTTGCTTGAAGAAGCCGAGTCTGAATACGGTTATAGCAGCCAAGGACCTTTGGCACTCCCTTGCCACGTTGACATCTTCTACAAGGTTCTCATGGAGATGGATCAAGAAGGAAATCGCACTGAACAAGCTCGTCAAGGATGTGCTTTTGGGAAGCGCACTCGATCCTACCATCTTCTTAGCCCTTCCAAAATGGCTGCCATAAACCACTTCTAA 411 0.4769 MTTRSRSWPSREYHSDATTVDHHQEKKGKRNKWRVAPEGCFTVHVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSSQGPLALPCHVDIFYKVLMEMDQEGNRTEQARQGCAFGKRTRSYHLLSPSKMAAINHF* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0602 136 PANTHER SMALL AUXIN-UP RNA-RELATED 5 115 - -
Dod01g0602 136 Pfam Auxin responsive protein 26 96 IPR003676 GO:0009733
Dod01g0602 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 115 IPR003676 GO:0009733
Dod01g0602 136 MobiDBLite consensus disorder prediction 1 31 - -
Dod01g0602 136 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0602 Dod-Chr1 10660033 10660845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0602 36 101 Calmodulin-binding Proteins AT5G20810 45.455 5.04e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0602 K14488 - mnt:21400477 171.4