Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0598 ATGAGCGTTTTAAGGCACCACCACCACCACTTTTTGCTGCTACCCATTTGGAGGATCATTAACAACACTAACACCCCACCAACAAGATCTCTTACATTTGTGAGAAATATCATCATGTCAGAATCAGGCCATTCTTCCCCTGCTTTTAGCACTCCAAGATTGGTTCTCAAGAAGGTTCTGGCCAAGTCTCAACATGAAGGGGATGGGGCAGTTGTTAGAAGAGGCATTGGGAGAAGCGAGTTGAGGAGCTTGGATCCCTTTCTGATGTTGGATCACTTCTCAGTGTCTCCACCTGGAGGATTCCCTGATCACCCGCACAGAGGTTTTGAGACCGTTACCTACATGCTAGAGGGTGGCATAACTCACCAAGATTTTGCTGGTCACAAGGGTACAATAAGAACCGGTGATGTTCAGTGGATGACCGCAGGGAGAGGAATAATTCACTCTGAAATGCCTGCAGACGCAACCAACAAGGGGTTGCAACTATGGATCAATTTATCAGCCAACGACAAGATGATTGAACCCAATTACCAAGAACTTCCAAGCGAGAACATATCAACAGCAGAACAAGATGGTGTTGAAGTGAGAATCATAGCAGGAGAAGCAATGGGGGTCCGTTCACCTGTTTACACTAGAACTCCAACCATGTTCCTTGATTTCACTTTGCAGCCAGGAGCTGAGTTTCATCAAAGCATTTCAGCAGTCATGGAACTCCTTTGTTTATGTGATTGA 732 0.4577 MSVLRHHHHHFLLLPIWRIINNTNTPPTRSLTFVRNIIMSESGHSSPAFSTPRLVLKKVLAKSQHEGDGAVVRRGIGRSELRSLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPADATNKGLQLWINLSANDKMIEPNYQELPSENISTAEQDGVEVRIIAGEAMGVRSPVYTRTPTMFLDFTLQPGAEFHQSISAVMELLCLCD* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0598 243 Gene3D Jelly Rolls 51 242 IPR014710 -
Dod01g0598 243 PANTHER PIRIN-LIKE PROTEIN 43 233 - -
Dod01g0598 243 SUPERFAMILY RmlC-like cupins 53 235 IPR011051 -
Dod01g0598 243 PANTHER PIRIN-RELATED 43 233 IPR012093 -
Dod01g0598 243 CDD cupin_pirin_N 70 166 - -
Dod01g0598 243 Pfam Pirin 73 164 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0598 Dod-Chr1 10617146 10619633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0598 50 232 Calmodulin-binding Proteins AT3G59220 65.574 2.27e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0598 K06911 - gmx:100775597 348.977