LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g0592	ATGCCGGAGCTTCGTAGCAGACCGCGGCGTGGTCGTGCTCAGGTTGGCCGCAGAAGCTCGGAACCACCGTCTCCGCCGGCGGCGGCGAAGAAGAACTACGTGAAGACACGAGCTGCGGTAGCCAGGGCTGCGGCGGCGGCTGCGGCGGAGGGGGAAGAAAGGCCAAGGACGCGTTTGGCGGCGGCGAAGAAATTAGAGCAGGAGAAGCCTCCGGTGATCGTGATATCGGAGGAGGAAGAACAGAACGAGAGCGACGTAGAGCGCGCGAAGCAGCAGAATCAGAATCAGAATCAGAATCAGAAGAAGAAGAAGGAGAAGAACGAAGAAGAGGAGCGAATCGAAGGAGGCGCGATGGGTGACGACAGTGGCGGGTTGAGTGCGAACAAGGGCGTTGCTCAAGAAGATGAGGGAAACACTGCACCTTTTCCTGAGAGGGTTCAAGTGGGAGGATCACCTGTGTACAAGGTGGAGAGGAAGCTGGGGAAAGGTGGGTTTGGTCAGGTTTTTGTTGGCCGGCGAGTTACCGGTGGTAATGACCGTAGTTCTGGCCCCGGCGCCACTGAGGTGGCTTTGAAGTTTGAACATAGGAATAGTAAAGGCTGTAATTATGGCCCTCCTTATGAGTGGCAAGTTTACAACACCCTCGGTGGCAGTCATGGAATACCAAAAGTACACTATAAAGGAAGACAAGGAGAATATTACGTAATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATTCCTCAAGCCAGGCGATGTCTGCGGAGATGGTTGCATGTATAGCTGTTGAGTCCTTGTCAATTCTGGAGAAGATGCATTTGAGAGGATATGTGCATGGAGATGTAAAACCAGAGAACTTTTTACTAGGCCAGCCAGCTACAGCACAGGAGAAGAAATTGTTTCTTGTTGATCTTGGATTAGCCACGAAGTGGAGAGACAGCTCCAGTGGGCAGCATGTTGATTATGATCAGCGTCCTGATATGTTTAGGGGGACTGTTCGGTATGCTGGAGTTCATGCTCATTTGGGAAGAACTGCCAGTAGAAGGGATGACCTTGAATCTCTTGCATATACACTCATCTTCCTTCATAAAGGCCGTTTACCTTGGCAAGGTTATCAGGGTGATAACAAGTCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCCGAGATGCTATGCTGCTTCTGCCCTCCTCCTTTTAGGCAATTTCTTGAGATTGTAGTGAACATGAAATTTGACGAAGAACCAAACTATTCTAAGCTAATATCTCTGTTTGATGGTATGCTTGGTCCAAATCCTGCATTGCGACCGATTAATACTGATGGTGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATATTGAGGAAGAGGATGATTCACAACCCAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATTTCGGTTTACAATGCAAGGCAGCCAATGAAACAGAGGTATCACTACAATGTAGCAGATGCAAGATTAGCACAGCATGTGGAGAGAGGGATTGCAGATGGCCTTCTTATTAGCTGTGTGGCTTCTTGTTCCAATCTCTGGGCGCTTATTATGGATGCTGGAACTGGTTTTACGACTCAAGTTTACAAGTTGTCACCTTGTTTCTTGCACAAGGAATGGATCATGGAGCAGTGGGAAAAGAACTATTACATTACTTCTATAGCTGGGGCTAATAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGTTTGTTTGCTTCGTTAAATTACTCTTCACCAGTTATCTCTTGTTTTTTTATGACTTGCAATGTAATTTCTGCAGGCACACAGTATACTCAACAATCATACAAAGTAAGTGATTCGTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTGACCTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTAGTTATGTCTCGAAATGCTGGGTTCAGTGATCAGGTTGTTGAACTTGATTTTCTCTATCCAAGTGAGGGCATTCACAGACGTTGGGATAGTGGTTACAGGATTACCGCAACTGCTGCTACATGGGATCAATCCGCTCTTATATTAAGCATTCCAAGGCGCAGGCCTGGTGATGAAACTCAGGAAACTCTGCGCACATCTCAATTTCCCAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCTTGTTTGTGCTATGGGCGCACAGTATGCTGA	2226	0.4717	MPELRSRPRRGRAQVGRRSSEPPSPPAAAKKNYVKTRAAVARAAAAAAAEGEERPRTRLAAAKKLEQEKPPVIVISEEEEQNESDVERAKQQNQNQNQNQKKKKEKNEEEERIEGGAMGDDSGGLSANKGVAQEDEGNTAPFPERVQVGGSPVYKVERKLGKGGFGQVFVGRRVTGGNDRSSGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQAMSAEMVACIAVESLSILEKMHLRGYVHGDVKPENFLLGQPATAQEKKLFLVDLGLATKWRDSSSGQHVDYDQRPDMFRGTVRYAGVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPPPFRQFLEIVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTDGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARQPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTTQVYKLSPCFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSKGLFASLNYSSPVISCFFMTCNVISAGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDSGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC*	742

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g0592	741	MobiDBLite	consensus disorder prediction	46	147	-	-
	Dod01g0592	741	Pfam	Protein kinase domain	154	441	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod01g0592	741	ProSitePatterns	Protein kinases ATP-binding region signature.	160	192	IPR017441	GO:0005524
	Dod01g0592	741	MobiDBLite	consensus disorder prediction	99	117	-	-
	Dod01g0592	741	CDD	STKc_CK1	154	429	-	-
	Dod01g0592	741	MobiDBLite	consensus disorder prediction	1	33	-	-
	Dod01g0592	741	MobiDBLite	consensus disorder prediction	49	76	-	-
	Dod01g0592	741	ProSiteProfiles	Protein kinase domain profile.	154	439	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod01g0592	741	SUPERFAMILY	Protein kinase-like (PK-like)	154	440	IPR011009	-
	Dod01g0592	741	Gene3D	Transferase(Phosphotransferase) domain 1	127	474	-	-
	Dod01g0592	741	PANTHER	CASEIN KINASE-RELATED	108	582	-	-
	Dod01g0592	741	SMART	serkin_6	154	448	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod01g0592	741	MobiDBLite	consensus disorder prediction	1	16	-	-
	Dod01g0592	741	PANTHER	SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	603	711	-	-
	Dod01g0592	741	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	280	292	IPR008271	GO:0004672\|GO:0006468
	Dod01g0592	741	PANTHER	SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	108	582	-	-
	Dod01g0592	741	Coils	Coil	75	113	-	-
	Dod01g0592	741	PANTHER	CASEIN KINASE-RELATED	603	711	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g0592	Dod-Chr1	10486522	10492073	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod01g0592	141	311	EF-hand Containing Proteins	AT4G36070	27.869	9.46e-08	53.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1-Pl	Dod01g0592		Pkinase	4.3e-16	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g0592	-		-	gmx:100819969	1192.95