Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0563 ATGGCGGAATCATCTCGTGAGGAGAATGTTTACATGGCGAAGCTGGCGGAGCAGGCTGAGCGGTACGAAGAGATGGTTGAGTTCATGGAGAAGGTTGCCAAGACTGTGGACATTGAGGAGCTCACTGTTGAAGAGAGGAACCTCCTCTCTGTCGCTTACAAGAATGTGATCGGCGCGAGGAGGGCCTCATGGAGGATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCAGGGGTAATGAGGACCATGTTGCTATTATCAAGGAGTACAGGGGAAAGATTGAAGCTGAGCTCAGCAAGATCTGTGATGGAATTTTGGACCTCCTTGAGTCTAATCTTATCCCATCTGCTAGCGCTGCTGAGTCTAAAGTGTTTTACCTCAAGATGAAGGGTGATTACCATAGGTACCTTGCTGAATTCAAGACTGGGGCAGAGAGAAAAGAAGCTGCTGAGAGTACTTTGTTAGCTTACAAGTCTGCTCAGGATATTGCTCTCGCTGACCTAGCCCCGACCCATCCGATAAGGCTGGGTCTGGCACTCAACTTCTCTGTGTTCTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAATCTTGCCAAGCAGGCATTTGATGAGGCAATTTCCGAGCTTGACACATTGGGAGAAGAATCATACAAGGACAGTACATTGATCATGCAACTTCTCAGAGATAATCTTACTTTGTGGACATCTGACATCACGGATGATGCTGGAGATGAGATCAAGGAAACATCTAAGCAACAACCAGGCGAGGCGCTTTAA 780 0.4744 MAESSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDIEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIEAELSKICDGILDLLESNLIPSASAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKQQPGEAL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0563 259 SMART 1433_4 6 249 IPR023410 -
Dod01g0563 259 Pfam 14-3-3 protein 12 236 IPR023410 -
Dod01g0563 259 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Dod01g0563 259 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Dod01g0563 259 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Dod01g0563 259 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Dod01g0563 259 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Dod01g0563 259 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Dod01g0563 259 SUPERFAMILY 14-3-3 protein 5 238 IPR036815 -
Dod01g0563 259 Gene3D - 1 249 IPR036815 -
Dod01g0563 259 Coils Coil 12 32 - -
Dod01g0563 259 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Dod01g0563 259 PANTHER 14-3-3-LIKE PROTEIN GF14-F 2 255 - -
Dod01g0563 259 PIRSF 14-3-3 1 248 IPR000308 -
Dod01g0563 259 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Dod01g0563 259 PANTHER 14-3-3 PROTEIN 2 255 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0563 Dod-Chr1 9882354 9886351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0563 4 258 14-3-3 family AT3G02520 90.625 3.75e-172 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0563 K06630 - gmx:547657 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0563 01 9882354 9886351 Dod01g0563 01 9882354 9886351 ECH