Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0542 ATGCTTGTTATGTTATCATGGAACAGATTGACGAAAATGTACACTTCAAGGAAGAAAATCCACAAGGATAAGGATGTCGAGCCAACCGAATTTGAGGAGACTGTTGCTCAGTACCTCTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGACTTAAAAGATCTCTACATAAATCAAGCAGTTCAAATGGATGTGGCCGGGAATCGCAAGGCTGTAGTCATCTACGTGCCTTACAGATTGAGGAAGGCATTCCGCAAAATTCATACTCGTCTTGTCCGAGAATTGGAGAAGAAGTTCAGTGGGAAGGATGTCGTGTTGATTGCAACAAGGAGGATAGTGCGGCCTCCAAAGAAAGGGTCTGCTGTTCAGCGACCCCGGACTCGCACCTTGACTGCTGTCCATGATGCTGTGCTTGAGGATGTTGTGCATCCTGCGGAGATTGTTGGCAAACGAGTCAGATACAGACTTGATGGATCAAAAATAATCAAAGTTTTCTTGGAAGCCAAGGAGCGCAACAGCACTGAATACAAGCTGGAGACTTTCTCTGGAGTTTACAGAAAGCTTACTGGAAAAGATGTTGTTTTTGAGTATCCAACTACAGAAGCCTGA 612 0.4428 MLVMLSWNRLTKMYTSRKKIHKDKDVEPTEFEETVAQYLFDLENTNQDLKSDLKDLYINQAVQMDVAGNRKAVVIYVPYRLRKAFRKIHTRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAVLEDVVHPAEIVGKRVRYRLDGSKIIKVFLEAKERNSTEYKLETFSGVYRKLTGKDVVFEYPTTEA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0542 203 Pfam Ribosomal protein S7e 19 198 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod01g0542 203 Coils Coil 39 59 - -
Dod01g0542 203 ProSitePatterns Ribosomal protein S7e signature. 91 104 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod01g0542 203 PANTHER 40S RIBOSOMAL PROTEIN S7 8 203 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod01g0542 203 PANTHER 40S RIBOSOMAL PROTEIN S7 8 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0542 Dod-Chr1 9513710 9516067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0542 13 203 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.628 2.92e-115 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0542 K02993 - gmx:100500684 355.525