Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0533 ATGGCAAGTGTTGCGGAAATGAATGACTGTATGGGGAAGAATTCCTCATGTTTGGCCATCACAGAGAAGAAGCCACAGAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCTTTGAATGGAAGAGGAAACTCGCCAAGAAAAAGCTCTTCTCTAAGAAGCTTTTGCCTCCTGTTCGTGCTAAAAAGTTTAGGGGAGATGAAAAAATGCCAAATTCCAAGCTCCACTTGATTGCTGAGAATAGCGGAGGTTTCCCAAGTGCCAAGAAAGGTGGGAATTGTGGTTTAGATGTGGTGCCGAAGAGTGAAATGCGAGTTCCGGGTCTGGTAGCTAGGTTGATGGGCCTGGAATCTATTCCGGCTGCAAAGCAAGATAAGTCTAAGAAGGCTTCACATTCTGATAGTTGTGGTTATGAGGAGGAGTCTAAGGGTAATTGTGAGTTCAATAGGCAGGTTGTGGATTTGGAAATAGAAGTTGCGAAGCAAGATTCAAGACCTCAGAAGCTTCAGAAAACTGGGATACATGAGAGAAGGGCAATGATTAGGTCTGGAGCAGGGGCACTGCAAATTAAGAGTGTTTTGTCAGGAGCAAGAAAGTATAATCATCATCATCATCACCACCCAAAGCTTGCTTCTCCTTTGAAAAGTCCAAGAACCACTTCAGGGAAGAGTGCCTCTCGAAGCTCTAGGTTGATAGGAGCAGCTACTAGAATTTTGGAACCTCGATTGTTGGCTAGGAGCCGAGCTAAAGGTTCTCTTACATATCATGCTTCCATGTGTCCTCCTAAAACTGGCATTGTGACAAATTGTGGGGGAACTAGGCCGGCAGTTATACAAAATCAACCTGATTATGATGCCTCCGCAGCCAAGCCTTTGATGGGGCAGACTTCTTGCAATAATTGTGGCAATTTAATTGATGTTGTTGACTGCAAGCTGGATTCTGGGGGACAGCCAGATCTTCCTTCCCCTATTGTTTCGGATGTGATCGCCGCAACCTCTACAGTATCAGCACAGAAGAAGGGAAGGTTATTCGCTCCCTCTCATGAACAAGAAAGAGATGCAGTTCTTCTAAAACGTCAGGGAAAAGCTCATTTCTCATGTTACTGA 1107 0.449 MASVAEMNDCMGKNSSCLAITEKKPQKPGGCVGIFFQLFEWKRKLAKKKLFSKKLLPPVRAKKFRGDEKMPNSKLHLIAENSGGFPSAKKGGNCGLDVVPKSEMRVPGLVARLMGLESIPAAKQDKSKKASHSDSCGYEEESKGNCEFNRQVVDLEIEVAKQDSRPQKLQKTGIHERRAMIRSGAGALQIKSVLSGARKYNHHHHHHPKLASPLKSPRTTSGKSASRSSRLIGAATRILEPRLLARSRAKGSLTYHASMCPPKTGIVTNCGGTRPAVIQNQPDYDASAAKPLMGQTSCNNCGNLIDVVDCKLDSGGQPDLPSPIVSDVIAATSTVSAQKKGRLFAPSHEQERDAVLLKRQGKAHFSCY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0533 368 Pfam DUF761-associated sequence motif 101 123 IPR032795 -
Dod01g0533 368 MobiDBLite consensus disorder prediction 214 228 - -
Dod01g0533 368 MobiDBLite consensus disorder prediction 198 228 - -
Dod01g0533 368 MobiDBLite consensus disorder prediction 198 212 - -
Dod01g0533 368 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 11 362 - -
Dod01g0533 368 MobiDBLite consensus disorder prediction 122 141 - -
Dod01g0533 368 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0533 Dod-Chr1 9372039 9373419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0533 17 307 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 43.234 7.34e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0533 - - aprc:113861902 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0533 01 9372039 9373419 Dod01g0533 01 9372039 9373419 ECH