Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0529 ATGGCTGATGTTGAATACCATGCAGCAAAATCGAACACCACCACCACCCCACCATCTCTAAAGCTATTTGGCATCAACATTCACAAACTCGTCCCAAAAGAAAACACTCATGAAAAAGAACCATGTTTGAAACAACCTCCATCACCACAACCACCACCACCACCAACATCACAACTACCAGATTCTCCTGACCCTTTATTAAACTCCCAAGATGCAAGAAAATACGAGTGCCAATACTGCTGCAGAGAGTTCGCCAATTCACAAGCACTAGGAGGGCACCAAAATGCACACAAGAAAGAGAGGCAACTCCTAAAGCGCGCTCAAATGCAAGCTGCTCGTGGCTTTGTTGCTTCACACATGATGCAAAACACAGTCATGTCATCATCGGGGTTCTCATCACCACAACTATTACATCATCATCTTATAGGTGGTGGTGGTGCACCACCACCTTCTCAGTCATCCTCGTGGCTATACCATGCAGGTGGTGGCACCACAGGATTTGGCATAAGTGGTGGTGCATGCCATCCAGGGGGAGCTATCATGACTCCTCCTGGAAGGCGTGTCTATGGTGGCGGTGGTTTTGGAAGGTCTCTCAATGTCACAACAACTTTATTAGCTGATGGTCGTGGCCGCCACCACCACCAACCTCTATCAGACTTTGGTAGTAGTGATGATAGTGGTGGCGCTGGATGCTTTAGCAGTAGCGAACAAGGTTTCGGTTTGAATTTGCATCTTAGCTTTATTATTGTTAGAGCGAGTATTCTCTGTAAGGACAATTGCGGCTGTGTCATCTGCATTTCTGCAAGTCCATAA 813 0.4686 MADVEYHAAKSNTTTTPPSLKLFGINIHKLVPKENTHEKEPCLKQPPSPQPPPPPTSQLPDSPDPLLNSQDARKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHMMQNTVMSSSGFSSPQLLHHHLIGGGGAPPPSQSSSWLYHAGGGTTGFGISGGACHPGGAIMTPPGRRVYGGGGFGRSLNVTTTLLADGRGRHHHQPLSDFGSSDDSGGAGCFSSSEQGFGLNLHLSFIIVRASILCKDNCGCVICISASP* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0529 270 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Dod01g0529 270 Gene3D Classic Zinc Finger 67 130 - -
Dod01g0529 270 MobiDBLite consensus disorder prediction 44 61 - -
Dod01g0529 270 SUPERFAMILY beta-beta-alpha zinc fingers 72 102 IPR036236 -
Dod01g0529 270 MobiDBLite consensus disorder prediction 33 68 - -
Dod01g0529 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Dod01g0529 270 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 246 - -
Dod01g0529 270 PANTHER ZINC FINGER PROTEIN 5 1 246 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0529 Dod-Chr1 9350371 9351654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0529 15 119 C2H2 Transcription Factor Family AT1G67030 52.381 2.67e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0529 - - aip:107638204 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0529 01 9350371 9351654 Dod01g0529 01 9350371 9351654 ECH