Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g0486 | ATGGCCTTGCAGAACATTGGTGCTAGTAACAGTGATGATGCCTTCTATAGGTATAAGATGCCTAAAATGATTACCAAAATTGAGGGTAGAGGTAATGGCATCAAAACTAATATTGTGAACATGGTTGATATTGCAAAAGCCTTGGCTCGGCCAGCTTCTTACACAACCAAGTATTTTGGTTGTGAACTTGGAGCCCAATCTAAATTTGATGAGAAAACTGGCACTTCTCATGTTAATGGGGCACATGAGACTGCAAAACTTGCTGGCCTTCTTGAGAACTTCATTAAGAAGTATGTCCAGTGTTACGGTTGTGGAAATCCTGAAACTGAGATCATTATTACTAAGAATCAAATGATTCAGCTGAAGTGTGCTGCATGTGGCTTTGTGTCTGATGTTGATATGAGAGACAAGTTGACTACCTTCATCATCAAGAACCCTCCTGAAGTAAAGAAAGGATCCAAAAACAATAAAGCCATGAGAAGAGCTGAGAAGGAAAGACTCAAGGAAGGTGAAGTAGCTGATGAGGAGCTGAAAAAACTGAAGAAGGAGGTTAAGAAGAAAGGCTCTTCATCTTCAAAGGATGGCACCACAAAATCTGGCTCTACGAAGAAGAAAGCTAATGGCTCTGATGAAGACCGTACATCCCCTACTCACAGTCAAATTGATGAGAGAGAGGCTGCTCATGATGAAGATGATGGTGATGTACAATGGCAAACAGATACATCACTAGAGGCTGCTCGTCAACGCATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAAATGAATCTGAGAAGGAGGAGAAGAAGGAACCCAGTAAGCTAAGTGATAGTTCTGAGAATGGCAACTCCATGCACTATAGGACATTGGCTGGGGAAGTGAAAGCAAAGTTGGAGAAAGGTGTTTCTGCGAAGGAATTGCAGTCCCATCTTGCTGCACTTCCTACCACTGCTCAGGAAAAGATGAGTGCTTTATATGAAGCCTTATTCGATGGCATTGAAAAAGGGTTCGGGAAAGAGGCAACTAAGAAGAGGAGCTACCTTGCTGCTGCAGTTGCTGAGGAAGAGGGTTTGCAGTTGTTATTGCTGAGTGCTATTGAGGAATTTTCTTGCAAGTCCACTTCGGGTGCTTTGAAAGAGGTTGCCCTGGTTTTGAAGGCGCTCTATGATGCTGATGTGCTGGAGGAAGAGCACATAGTGCAGTGGTATCAAAACGGGCTGAAAGGTGATAACAAGGAATCTATGATCTGGAAGAATGTCAAACCCTTCGTTGATTGGCTCCAGACTGCGGAATCAGAGTCGGGGGAAGAGTAA | 1329 | 0.4357 | MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKNNKAMRRAEKERLKEGEVADEELKKLKKEVKKKGSSSSKDGTTKSGSTKKKANGSDEDRTSPTHSQIDEREAAHDEDDGDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNESEKEEKKEPSKLSDSSENGNSMHYRTLAGEVKAKLEKGVSAKELQSHLAALPTTAQEKMSALYEALFDGIEKGFGKEATKKRSYLAAAVAEEEGLQLLLLSAIEEFSCKSTSGALKEVALVLKALYDADVLEEEHIVQWYQNGLKGDNKESMIWKNVKPFVDWLQTAESESGEE* | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g0486 | 442 | MobiDBLite | consensus disorder prediction | 266 | 290 | - | - | |
Dod01g0486 | 442 | Gene3D | - | 2 | 104 | - | - | |
Dod01g0486 | 442 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 98 | 133 | IPR016190 | GO:0003743|GO:0006413 | |
Dod01g0486 | 442 | SMART | 542_3 | 350 | 438 | IPR003307 | GO:0005515 | |
Dod01g0486 | 442 | CDD | W2_eIF5 | 325 | 439 | - | - | |
Dod01g0486 | 442 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 442 | IPR045196 | GO:0003743|GO:0006413 | |
Dod01g0486 | 442 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 364 | 442 | IPR003307 | GO:0005515 | |
Dod01g0486 | 442 | Pfam | Domain found in IF2B/IF5 | 11 | 127 | IPR002735 | GO:0003743|GO:0006413 | |
Dod01g0486 | 442 | ProSiteProfiles | W2 domain profile. | 285 | 442 | IPR003307 | GO:0005515 | |
Dod01g0486 | 442 | SUPERFAMILY | ARM repeat | 292 | 436 | IPR016024 | - | |
Dod01g0486 | 442 | MobiDBLite | consensus disorder prediction | 150 | 235 | - | - | |
Dod01g0486 | 442 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 10 | 101 | IPR016189 | GO:0003743|GO:0006413 | |
Dod01g0486 | 442 | SMART | eIF2Bneu4 | 15 | 129 | IPR002735 | GO:0003743|GO:0006413 | |
Dod01g0486 | 442 | MobiDBLite | consensus disorder prediction | 147 | 235 | - | - | |
Dod01g0486 | 442 | Gene3D | - | 284 | 442 | - | - | |
Dod01g0486 | 442 | MobiDBLite | consensus disorder prediction | 266 | 281 | - | - | |
Dod01g0486 | 442 | Gene3D | - | 105 | 145 | - | - | |
Dod01g0486 | 442 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE | 1 | 442 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g0486 | Dod-Chr1 | 8666277 | 8668979 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g0486 | 1 | 435 | Eukaryotic Initiation Factors Gene Family | AT1G77840 | 62.162 | 1.21e-179 | 507 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g0486 | K03262 | - | gmx:100777906 | 664.455 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g0486 | 01 | 8666277 | 8668979 | Dod01g0486 | 01 | 8666277 | 8668979 | ECH |