Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0472 ATGAAGTGCGATGTTGATATCAGGAAAGACCTGTATGGTAACATTGTCCTATCAGGAGGAACAACCATGTTCCCAGGCATTGCTGATAGAATGAGCAAGGAAATTTCTGCATTGGCCCCCAGTAGCATGAAGATCAAGGTGGTAGCACCACCCGAGAGAAAATACAGTGTCTGGATTGGTGGTTCTATCTTGGCATCCCTCAGCACCTTCCAGCAGATGTGGATTGCAAAGGCTGAATATGATGAGTCTGGACCATCAATTGCTGGGTTTGCTGGAGATGATGCCCCAGGTGCTGTGTTTCCGAGCACTGTTGGTCCTCCACGTGATTTTTTTGCTGGAGATGCATATTTTGGTGATGTGGCAATGTCTAAGCGTGGTATTCTGACTCTCAAGTACCCCATTGAGCATGGAGTTGCGTGCAACTGGGATGATATGGAGAAGATTTGGCATCATACCTTTTATAATGAGCTTCGTGTTGACCCAAAAGAGCATCTAGTTTTGTTAAGTGAGGCTCCTCTTAACCCAAGGGAAAACCGTGAGAAGATGGCATAA 552 0.4601 MKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIAGFAGDDAPGAVFPSTVGPPRDFFAGDAYFGDVAMSKRGILTLKYPIEHGVACNWDDMEKIWHHTFYNELRVDPKEHLVLLSEAPLNPRENREKMA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0472 183 CDD NBD_sugar-kinase_HSP70_actin 141 183 - -
Dod01g0472 183 Gene3D - 1 56 - -
Dod01g0472 183 ProSitePatterns Actins signature 2. 74 82 IPR004001 -
Dod01g0472 183 PRINTS Actin signature 112 123 IPR004000 -
Dod01g0472 183 PRINTS Actin signature 178 183 IPR004000 -
Dod01g0472 183 PRINTS Actin signature 124 146 IPR004000 -
Dod01g0472 183 PRINTS Actin signature 95 104 IPR004000 -
Dod01g0472 183 Pfam Actin 88 182 IPR004000 -
Dod01g0472 183 Pfam Actin 2 87 IPR004000 -
Dod01g0472 183 Gene3D - 88 183 - -
Dod01g0472 183 SUPERFAMILY Actin-like ATPase domain 1 87 IPR043129 -
Dod01g0472 183 Gene3D - 57 87 - -
Dod01g0472 183 PANTHER ACTIN 88 183 IPR004000 -
Dod01g0472 183 PANTHER ACTIN 1 87 IPR004000 -
Dod01g0472 183 SUPERFAMILY Actin-like ATPase domain 88 183 IPR043129 -
Dod01g0472 183 PANTHER ACTIN-97 88 183 - -
Dod01g0472 183 PANTHER ACTIN-97 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0472 Dod-Chr1 8488180 8491704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0472 1 87 Cytoskeleton Gene Families AT3G12110 98.851 1.09e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0472 K10355 - hame:121853497 282.722