Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0431 ATGTCAGAAGCTACTCATTATAGTTCACTTGATATTGCAAAAATGAGAAATGCTCTTCTATCATCAGTTCCTTCACCCCTTCACTGCTATGACGATGAAGTTCAGTTGGAAATTTTAAAAGGTTCCATGCAGATGGACAACCTAATTAGTGGTCATTTTCATAGCAATGGACTCAACATGGAGTCTAGAGTATTCAACAATGACAACCAACTAGACAAAGGAGTCTGTACAGTGCCTATGCAGTCTCATCCTCTGATTTCTAACATTCATCAACAAGAGAGTCTATATGGCATCTCAAGCAGCAAAGACATTACTCAGCAGTCACTGTTACTTGTCAAGAGTTCTTCAAGTTCTCAACATGAAGGAGTCAGTGGACATGGTAGAAAACGCCCATTTGAGCATGCTGACAACTTGTCCTTGTGCAAAAGGATGAAATGCAATTCCACTAGCAAAATCGCATTGGAACCACAATGGCATCAAGCTAGAGAAGCTTCAGAGTTAATCCCTGGACACAAATTGCATGTGCCTATGAAGAGGACTCAGAAGCTCAGCGACAAAATTACAATTCTTCAAAAGCTGGTTTCACCTTTTGGCAAGACTGATACTGCCTCAGTTCTTCATGAGGCTGCTCTTTATATCAAGCTTCTTCAGTCTCAAATCCGGACTTTGTTTCAGATGCTGAGTTGCTCCTACATTAGCACGGCCAAAGATCCTCATAATCAGGAATGTGAAAACAAACTGCAGGTTGACCTAAGGAGCAGAGGACTTTGTTTGGTTCCTATATCAATCACACATAAAGTAGCAATGGAAGATCAGATTCATCATGATTCTACCTCAAGAACTATCTTGCCATGA 855 0.407 MSEATHYSSLDIAKMRNALLSSVPSPLHCYDDEVQLEILKGSMQMDNLISGHFHSNGLNMESRVFNNDNQLDKGVCTVPMQSHPLISNIHQQESLYGISSSKDITQQSLLLVKSSSSSQHEGVSGHGRKRPFEHADNLSLCKRMKCNSTSKIALEPQWHQAREASELIPGHKLHVPMKRTQKLSDKITILQKLVSPFGKTDTASVLHEAALYIKLLQSQIRTLFQMLSCSYISTAKDPHNQECENKLQVDLRSRGLCLVPISITHKVAMEDQIHHDSTSRTILP* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0431 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 216 IPR011598 GO:0046983
Dod01g0431 284 CDD bHLH_AtbHLH_like 178 223 IPR045239 -
Dod01g0431 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 270 - -
Dod01g0431 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 226 IPR036638 GO:0046983
Dod01g0431 284 PANTHER TRANSCRIPTION FACTOR BHLH112 37 270 - -
Dod01g0431 284 Gene3D - 175 247 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0431 Dod-Chr1 7808781 7812908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0431 177 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.364 1.37e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0431 - - ccaj:109812405 330.487