Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0414 ATGATGGGATCGAGAGGATTGTTCGGGTGGTCGCCGCCGCACGTGCAACCGCTGACGCCGGTCTCGGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCGTACCTGGACCCTAGCGCCGAGGCCTTGGGGACGCAGCAGCAGCAGCAGCAGATGGAGCTCGAGGAGGAGATGGAGGAGCCGGAGGAGGTGGAGCCGCCGCCGGCTGCGGTTCCGTTCTCGCGCCTCTTCGCATGCGCCGACCGGCTCGACTGGTTCCTCATGGCCGCCGGTTCGGTCGCCGCTGCGGCTCACGGCGCAGCTCTCGTCGTCTACCTGCACTACTTCGCGAAGATCATCCACGTCCTGCGGATGGATCCTCGGCAAGAGCACGAGCAGTTTCACAGGTTCACCGAGCTTGCTTTAACCATTGTTTATATTGCTGTGGGAGTGTTTGCAGCTGGTTGGATTGAGGTTTCTTGTTGGATTTTGACCGGAGAACGGCAGACTGCTGTCATCAGGTCAAAATATGTTCAAGTGTTGTTAAATCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCACAATATGGCTACATTCTTCAGTGGTCTTGCCATTGGACTCATAAATTGTTGGCAGATTGCTTTGATAACATTAGCCACAGGCCCATTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTCCACAGGCTTGCAGAGAATATTCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAGGCAGTTTCGTATGTAAGGACATTGTATGCATTTACTAATGAAACATTGGCCAAGTATTCATATGCAACATCACTGCAAGCCACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGTTCTTGTGCATTGCAACTTTGGGTTGGACGGTTCTTGATTATCCATGGAAAAGCACATGGCGGTGAAATTATAACAGCTCTGTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCTTATAGATTATTTGAGATGATAAGCCGGTCATCCTCATCTGATGATCATGATGGCACTGCTCCTGATTCTGTGCAAGGAAATATAGAGTTTCGGAATGTCTATTTCAGTTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCAGTGTACCTGCTAAGAAAGCCGTGGCTCTTGTTGGCAGAAATGGCTCTGGGAAAAGTAGTATTATTCCACTCATGGAGCGTTTCTACGATCCTACATTAGGGGAAGTTCTTCTAGATGGAGAAAACATCAAGAATTTGAAACTTGAATGGCTGAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGCTTGAGTATAAGAGACAACATTGCTTATGGAAGGGATGCTACCATTGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTCATAAGCTCACTGAGGAGAGGTTATGACACACAGGTTGGCAGGGCTGGTCTGGCTTTGACTGAAGAACAAAAAATAAAACTTTCTATTGCTAGAGCTGTGCTATTAAAGCCGTCAATTCTTTTACTTGACGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGAGGCTCTTGATTTTCTTATGTTGGGACGCTCAACTATAATAATTGCTCGAAGGCTTAGTCTCATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCACGATGAATTATTGACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGCGAGGAGGCTACAAAACTTCCCAAGAGGATGCCCATGCGAAATTACAAGGAGAGTGCAGCATTCCAAATTGAGAAGGATTCTTCAGCAAATCAGAGCTTCAAAGAACCATCATCCCCTAAAATGATGAAGTCACCTTCTCTTCAAAGAGTTTCTAATGTATCCCGGCCTCTAGATGGCGGCTTTAACCTACAAGAATCACCAAAAGTCCGGAGCCCACCAGCAGAGAAGATGCTGGAAAATGGTCAGGCCTTGGATACTGCAGATAAGGAGCCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGACTGCCAGAGTTGCCCAAGATTGATGTTCAGTCTGTGCATCAACAAAAATCAAATGGTTCTGACCCAGAATCCCCTGTTTCTCCTCTTTTAACATCTGATCCCAAGAGCGAACGCTCCCATTCACAAACTTTTAGTAGACCGCAGAGTCATTCTGAGGATGTTTCACTTGAAATGAGAGAGTCAAAGGATTCACGGCATCGAAAGCCGCCTTCACTTCGGAAGCTGGCTGAGCTTAGTTTTGCTGAGTGGCTCTATGCTGTGTTAGGCAGCATAGGTGCAGCTATCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTTATTGGCCTTGTGGTGACAACTTACTATAGAATTGATGAGGATCATCACTTACGATGGGAGGTTAACAGGTGGTGCATGACAATTGGTTGCATGGGTATTGTGACAGTCATTGCCAACTTTTTGCAGCATTTTTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTTTCAGCCATGCTACGCAATGAAGTAGGATGGTTTGATGATGAGGAAAACAGTGCTGACAATTTATCCATGCGATTAGCCAATGATGCTACTTTTGTACGAGCTGCTTTTAGCAACCGGCTTTCTATATTTATTCAGGACAGTGCTGCAGTTATTGTTGGTCTTCTCATTGGTGCCTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCTACCCTTCCAATTCTCTGTGTAGCTGCTATTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAGGATGCCGTCAGAAACATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAGCTCTATAGGCTGCAGTTGAAGAAAATATTTAGGCAGAGCTTTCTTCATGGAATGGCAATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTGTAAAAAAGGGTTATATGGATCCACCTACTGCGCTCAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTTGAGCCTTTTGGATTGGCTCCTTACATCCTTAAACGCCGGAAATCTCTCATATCAGTGTTTGAAATTATAGATCGTGTGCCTAAAATTGACCCTGATGATAGCTCTGCATTGAAGCCACCTAATGTACATGGAAGAATTGAGTTAAAAAATGTTGATTTTTGTTACCCAACTCGTCCAGAAGTTTTGGTATTGAGCAATTTTAGTCTCAAAGTCAATGGGGGACAAACAGTTGCTATCGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCTTTGATTGAGAGATTTTATGATCCAGTTGCTGGTCAAGTTTTACTTGATGGGAGGGATTTAAAGCTCTACAACTTGCGATGGCTGAGGAGCCATCTTGGTCTGGTTCAACAGGAACCTATTATCTTCTCAACAACCATAAGAGAGAACATTATATATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGGATAGCAAATGCTCATCATTTCATTAGCAGCTTGCCCCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCTGGACAAAAACAGAGAATTGCAATTGCGAGGGTGGTGCTGAAAAATGCACCTATCTTGTTGTTGGATGAAGCAAGCTCATCAATTGAATCTGAGTCAAGTCGAGTGGTGCAAGAGGCTCTAGACACGCTAATAATGGGAAACAAGACCACTATTTTAATAGCGCATAGGGCTGCAATGATGAGGCACGTTGACAATATTGTAGTGCTGAATGGAGGGCGGATAGTGGAGGAGGGGACTCATGATTCATTGATAGCTAAGAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGGCTCTGCGTCAGCACCGGTTTGTTTAA 4218 0.4426 MMGSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPSAEALGTQQQQQQMELEEEMEEPEEVEPPPAAVPFSRLFACADRLDWFLMAAGSVAAAAHGAALVVYLHYFAKIIHVLRMDPRQEHEQFHRFTELALTIVYIAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLIIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSDDHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATIDQIEEAAKIAHAHTFISSLRRGYDTQVGRAGLALTEEQKIKLSIARAVLLKPSILLLDEVTGGLDFEAERAVQEALDFLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPMRNYKESAAFQIEKDSSANQSFKEPSSPKMMKSPSLQRVSNVSRPLDGGFNLQESPKVRSPPAEKMLENGQALDTADKEPSIKRQDSFEMRLPELPKIDVQSVHQQKSNGSDPESPVSPLLTSDPKSERSHSQTFSRPQSHSEDVSLEMRESKDSRHRKPPSLRKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTTYYRIDEDHHLRWEVNRWCMTIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCVAAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFRQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICVKKGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSALKPPNVHGRIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLIAKNGLYVRLMQPHFGKALRQHRFV* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0414 1405 MobiDBLite consensus disorder prediction 756 814 - -
Dod01g0414 1405 Gene3D - 1154 1393 IPR027417 -
Dod01g0414 1405 Coils Coil 255 275 - -
Dod01g0414 1405 Pfam ABC transporter 1174 1322 IPR003439 GO:0005524
Dod01g0414 1405 SUPERFAMILY ABC transporter transmembrane region 815 1141 IPR036640 GO:0005524|GO:0016021
Dod01g0414 1405 Pfam ABC transporter transmembrane region 838 1102 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g0414 1405 Pfam ABC transporter transmembrane region 91 359 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g0414 1405 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1156 1393 IPR003439 GO:0005524
Dod01g0414 1405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 88 376 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g0414 1405 Gene3D ABC transporter type 1, transmembrane domain 74 659 IPR036640 GO:0005524|GO:0016021
Dod01g0414 1405 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 409 644 IPR003439 GO:0005524
Dod01g0414 1405 CDD ABC_6TM_Pgp_ABCB1_D1_like 123 384 - -
Dod01g0414 1405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 833 1125 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g0414 1405 CDD ABC_6TM_Pgp_ABCB1_D2_like 828 1139 - -
Dod01g0414 1405 MobiDBLite consensus disorder prediction 1 66 - -
Dod01g0414 1405 Gene3D ABC transporter type 1, transmembrane domain 1009 1153 IPR036640 GO:0005524|GO:0016021
Dod01g0414 1405 Gene3D ABC transporter type 1, transmembrane domain 772 997 IPR036640 GO:0005524|GO:0016021
Dod01g0414 1405 SMART AAA_5 1183 1370 IPR003593 -
Dod01g0414 1405 SMART AAA_5 436 615 IPR003593 -
Dod01g0414 1405 MobiDBLite consensus disorder prediction 669 703 - -
Dod01g0414 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1145 1392 IPR027417 -
Dod01g0414 1405 SUPERFAMILY ABC transporter transmembrane region 75 384 IPR036640 GO:0005524|GO:0016021
Dod01g0414 1405 MobiDBLite consensus disorder prediction 756 797 - -
Dod01g0414 1405 Pfam ABC transporter 430 574 IPR003439 GO:0005524
Dod01g0414 1405 Gene3D - 399 646 IPR027417 -
Dod01g0414 1405 MobiDBLite consensus disorder prediction 798 814 - -
Dod01g0414 1405 Coils Coil 39 59 - -
Dod01g0414 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 643 IPR027417 -
Dod01g0414 1405 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1401 - -
Dod01g0414 1405 MobiDBLite consensus disorder prediction 669 736 - -
Dod01g0414 1405 PANTHER ABC TRANSPORTER B FAMILY 19 1401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0414 Dod-Chr1 7120743 7131020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0414 57 698 Calmodulin-binding Proteins AT2G36910 43.846 1.84e-167 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0414 K05658 - gmx:100789116 2470.66