Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0411 ATGGTGGGAAGCAGCAGCAACAACAACGATGACGATGCTCGTCACCGGAAAATGTTCTGGCGGTCGCAATCGTGGTCCTCCTCCCGTTCAGCAGCCGCGAGCAACAACCCTTCCGGCGAGCCTGATCCGAATTCCGGCGGAAGCGGCCAGAACCGCCGCCTCCCTCCGGCGCCGCCGCTGACGCCGCGATCGCAGCAGAACTGCAAGGCACGGTCGGCCCTTCCGCCGCTGTCGATATCCCGGCGAAGCCTCGACGAGTGGCCGCGGGCGAGCTCCGACGACATCGGTGAATGGCCGCCGCAGCCGCCTCTGACGCCCGGTGGTGGCGGGAGAGGTAACAATGGTGAAAGGTTGAAACTTGATTTGTCATCAATTCAGATGAACAGTGATAGGAACAGTGGAATTATTAGTACTGGTAGTAATAATGGTAACAACAACAATAATAGTAACAGTAGTAGTAATAATAATAATGGTGGTGGTGGATTGTTGAAGAGAGATAGGATTGCCTTTTTTGATAAGGAGTGTTCAAAGGTTGCTGATCATGTGTACCTTGGTGGTGATGCTGTTGCTAGGAATAGGGATATATTGAAGAAGAATGGTATCACTCATGTCTTGAATTGTGTTGGTTTTGTGTGCCCTGAGTACTTCAAAGCTGATTTTGTGTACAGAACACTCTGGTTACAGGATAGTCCATCTGAGGATATCACTAGTATTCTGTATGATGTGTTTGATTACTTTGAGGATGTCAGGGAGCAAGGTGGGAGGGTGTTTGTCCACTGTTGTCAGGGGGTTTCGAGGTCCACCTCGCTCGTCATCGCGTATTTGATGTGGAGGGAAGGGCAGAGCTTTGATGATGCTTTTCAGCTTGTGAAGGCTGCGAGGGGTATTGCTGATCCAAATATGGGGTTTGCTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTCCATGCTGTCCCTCTTAGCCCTAGCTCTTTGTTGAGGATGTATAGGATGGCACCTCACTCACCGTATGATCCTTTGCATCTAGTGCCGAAAATGTTGACTGATCCTTCTCCATTGGGTCTGGACTCCAGGGGTGCGTTTATTGTGCACATTCCTTCTGTGATATATGTTTGGATTGGTAAGAATTGTGAGGCAATGATGGAAAGGGATGCCAGAGACGCAGTTGGTCAGATTGTTCGCTATGAGAGAGTGGAAGGACCTATTGTGTTGGTTAGGGAAGGTGACGAACCGGCTGGGTTTTGGGATGCTTTTTCCAAATTCTTGCCCCTGATGGAAAAATCTGGTGGCAGTGTGGAAAATAGCAAATCAAGTGCTAAGGTTTGGCCTGGTGAGAGGAAAGTCGACTTGTACAATGTTGATTATGAAGTTTTTCAAAAAGCGATTGTTGGGGGTTTTGTGCCTCCATTTCCATCGTCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGTGAGTAGTTGGAGTGCTTTAAGGCGAAAAGTTTCCTCTGCTAAAATGAAGGAGTTTGTCTCAGCCCCTAAGTTATCCTTTCCAAGGGTTTATTCTGATTCCATGTTGTGTATCCATACATCAGCAAATTCATCTCCATCCTCATTAGTGTCATCATCGTCATCGTCTTTATCATCATCCTCACCTTTGTATGTCTCTCCAGATTCCATTTCTTCTGATTTGAGCCCCCATCGAATGTTCTTGTCAGAAATGTCCCCAGATAACTCTGCAGTTTTGACGGCTATTCCAGTGCCACAGTCTTTGTCTAAGTTTTCTAAATTGTCCCTCTTGCCAAATTCTACTTCTCAGCCAGTGTCTAACAGTGTAGATATCCATGATGTCATATTATCACATCCTTGTTCTCAGTCAGCCTCTTTACCATTGAAAAAACCATTAACTTCCCTTGCTGAACGGAGAGGTAGTTTGTCAAAGTCTTTGAAGTTGCCTATAACAAATGATAAGACACAGGTAATAGATAAACCATTGACTTTTCCTGCTAGTTGGCAAGATGGGGTTCTTGTGAATGGTGATGTCAGCTATTTGCAGCAATCAGATAGTACATGTAATTCTGGTGAGACCAACAACAATATCTACAAGGAAACTATGCTTGTTAGAAGCTGTGGTGAGTCTGTGACAGATAGTTCTTCAAGAGTAGACTTGAAGTCTTCCTCATTGAATGGAATTGATGCGGTTGGCTCATTGCAATATAACAAGACTCAAACTTTAGCCTATCACTGGCCCAGTTTGGAAAAGATTGAGGCATTTAGTGCAAGTCATCTGGATTCCAAAGCTACTTTTGCCGTGTTCTCTCCAAGTATGTATGTACAGGCTGGAAACATTTTATATTTTTGGGTAGGTAGGTCTTTCAGTTGTGATGCTTCACAGGTTCGATTAGACAGTGATAGAAAGTCAGATTTTATGGGAGCAATTGACTGGAATCGAACTGGTCATGATGTCCTTGTTCGGTTAAATTTGCCAAAGAATACCGTCATCAAGATCATTAGAGAGAATGAAGAACCACAAGAGTTCCTTTCTTTGCTGAGCTCATTGTAG 2541 0.4534 MVGSSSNNNDDDARHRKMFWRSQSWSSSRSAAASNNPSGEPDPNSGGSGQNRRLPPAPPLTPRSQQNCKARSALPPLSISRRSLDEWPRASSDDIGEWPPQPPLTPGGGGRGNNGERLKLDLSSIQMNSDRNSGIISTGSNNGNNNNNSNSSSNNNNGGGGLLKRDRIAFFDKECSKVADHVYLGGDAVARNRDILKKNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRMAPHSPYDPLHLVPKMLTDPSPLGLDSRGAFIVHIPSVIYVWIGKNCEAMMERDARDAVGQIVRYERVEGPIVLVREGDEPAGFWDAFSKFLPLMEKSGGSVENSKSSAKVWPGERKVDLYNVDYEVFQKAIVGGFVPPFPSSEDEHETHLPARVSSWSALRRKVSSAKMKEFVSAPKLSFPRVYSDSMLCIHTSANSSPSSLVSSSSSSLSSSSPLYVSPDSISSDLSPHRMFLSEMSPDNSAVLTAIPVPQSLSKFSKLSLLPNSTSQPVSNSVDIHDVILSHPCSQSASLPLKKPLTSLAERRGSLSKSLKLPITNDKTQVIDKPLTFPASWQDGVLVNGDVSYLQQSDSTCNSGETNNNIYKETMLVRSCGESVTDSSSRVDLKSSSLNGIDAVGSLQYNKTQTLAYHWPSLEKIEAFSASHLDSKATFAVFSPSMYVQAGNILYFWVGRSFSCDASQVRLDSDRKSDFMGAIDWNRTGHDVLVRLNLPKNTVIKIIRENEEPQEFLSLLSSL* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0411 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 169 315 IPR029021 -
Dod01g0411 846 SUPERFAMILY Actin depolymerizing proteins 747 844 - -
Dod01g0411 846 MobiDBLite consensus disorder prediction 20 51 - -
Dod01g0411 846 SMART VILL_6 337 420 IPR007122 GO:0051015
Dod01g0411 846 Pfam Dual specificity phosphatase, catalytic domain 182 312 IPR000340 GO:0008138|GO:0016311
Dod01g0411 846 ProSiteProfiles Dual specificity protein phosphatase domain profile. 174 316 IPR020422 GO:0006470|GO:0008138
Dod01g0411 846 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 4 840 - -
Dod01g0411 846 Gene3D Protein tyrosine phosphatase superfamily 145 316 IPR029021 -
Dod01g0411 846 PANTHER MKPA PROTEIN 4 840 - -
Dod01g0411 846 SMART dsp_5 174 313 IPR020422 GO:0006470|GO:0008138
Dod01g0411 846 MobiDBLite consensus disorder prediction 129 159 - -
Dod01g0411 846 SUPERFAMILY Actin depolymerizing proteins 321 428 - -
Dod01g0411 846 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 233 294 IPR000387 GO:0016311|GO:0016791
Dod01g0411 846 Gene3D Severin 326 421 IPR029006 -
Dod01g0411 846 CDD DSP 175 309 - -
Dod01g0411 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 258 268 IPR016130 GO:0016311|GO:0016791
Dod01g0411 846 MobiDBLite consensus disorder prediction 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0411 Dod-Chr1 7097980 7104390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0411 1 210 Protein tyrosine phosphatase (PTP) family AT3G55270 52.273 7.57e-53 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0411 - - mtr:MTR_7g023250 1064.29