LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g0408	ATGGAGGTAACCCACGCATCCCCTAGCTTCTCCGACCTCTCCGCCTTCTCCGCCACCATGCCGGCGCCGCAGACCACCGCAACCGCCACGGCGCGTCCCGTCAGGATCATCCCCTTGCAGCACCCGACCGTTGCGTCTTCGTCTTCGTCTTCGCCGCCGCCGCTCCCGTTCGCATTCTCTCAGTTCGCGGCGAAGCTCCGGAGAATGACGTGGCTTGAGTGGATCGAGTTCTTCCTCCCTTGCTACCGTTGGATTCGCACCTACAAATGGCGCGAGTATTTCCAGGTTGATCTCATGGCCGGTATCACCGTCGGCGTCATGCTAGTTCCTCAGTCAATGTCTTATGCAAAATTAGCAGGGCTTCAACCGATATATGGACTTTACTCCGGTTTTGTGCCCATATTTGTGTATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCAGTAGCATTGGTTTCTCTCTTGTGCTCTAATGTGCTAAGTAGCATAGCTGATCCATCCACTGACTTTTACACCGAGCTTGCAATACTATTGGCTCTTATGGTTGGGATATTGGAATGCATAATGGGACTCTTGAGGCTTGGATGGTTGATTCGTTTCATTAGCCATTCTGTTATCTCTGGCTTTACAACTGCTTCAGCTATTGTAATTGGTTTATCTCAAGCGAAATACTTCTTGGGGTATGACGTAGACGGAAGTAGCAAGATCATACCAGTGGTTAAGAGTATAATAGCTGGAGCACCTAAGTTTTCATGGCCCCCTTTTGTGATGGGTTCAATTATGCTTGCAATACTACTTACCATGAAGCACCTGGGAAAAACGAGGAAGCACTTGAGATTCTTGAGAGCTGCAGGTCCTCTCACAGCAGTAGTTCTGGGAACTGTCTTTGTAAAAATGTTTCATCCATCATCAATTTCTCTGGTCGGAGATATACCTCAGGGCCTTCCAAAATTTTCTGTTCCCAAAGCTTTTGAGTATGCCGTGTCCTTAATTCCAACTGCCTTTCTCATAACTGGTGTGGCTATATTGGAATCAGTGGGGATTGCCAAAGCATTAGCAGCGAAAAATGGATATGAGTTGGATTCAAATCAAGAGTTGGTTGGTCTTGGCATTTCCAATGTTCTTGGTTCATTCTTTTCGGCATACCCCACTACAGGATCCTTTTCAAGGTCAGCTGTCAATTATGAAAGTGGTGCAAAATCTGGAATATCTGGGATTGTTTCAGGAATTATAATAACCTGTGCACTTATGTTCCTAACTCCATTGTTTGAGTACATACCTCAGTGTGCTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGCCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAAAAAGATTTTCTTCTTTGGACCATTACCAGCATTACAACATTGTTCCTTGGTATTGAGATTGGCGTACTTGTAGGGGTTGGTGTGTCGCTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGCCGTTTGCCAGGGACAACTGTTTATAGAAATGTTAAACAGTATCCTGAATCATATACATACAACGGAATTGTAATTGTTCGTATTGATGCTCCGATTTATTTTGCAAACATAAGTTTCATAAAGGACAGGTTGCGGGAATATGAAGTTCATGTTGATAAGTCTACAAGACACGGACCTGAGGTTGAAAGAATATACTTTGTGATTCTAGAGATGGCGCCTGTGACCTATATAGACTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAACTAAGGGACATTCAGATTGCAATATCCAATCCAAGCCCAGAAGTTCTGCTCACATTGTCTAGATCTGGTGTGGTGGAGCTGATAGGCAAAGAGTGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCATGTTCAGAGATTGAAACCAGGATCAAACAGTTCACAAGCGCCATCCTCTATGCAAGAAGACAAACAACCAAGTTTGTTTGAGCGATTACTCAAACAGAGAGGAGAAAACTTTTCAATTACCGACTTGGAATCTGGTAATGGCAGCAGACCTCCACTTTCCAAGGACAAAGATTCCCAATTAGAGCCATTGTTGTCAAAAGAACATTGA	2139	0.4455	MEVTHASPSFSDLSAFSATMPAPQTTATATARPVRIIPLQHPTVASSSSSSPPPLPFAFSQFAAKLRRMTWLEWIEFFLPCYRWIRTYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLCSNVLSSIADPSTDFYTELAILLALMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDVDGSSKIIPVVKSIIAGAPKFSWPPFVMGSIMLAILLTMKHLGKTRKHLRFLRAAGPLTAVVLGTVFVKMFHPSSISLVGDIPQGLPKFSVPKAFEYAVSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELVGLGISNVLGSFFSAYPTTGSFSRSAVNYESGAKSGISGIVSGIIITCALMFLTPLFEYIPQCALAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSITTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPESYTYNGIVIVRIDAPIYFANISFIKDRLREYEVHVDKSTRHGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGVVELIGKEWYFVRVHDAVQVCLQHVQRLKPGSNSSQAPSSMQEDKQPSLFERLLKQRGENFSITDLESGNGSRPPLSKDKDSQLEPLLSKEH*	713

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g0408	712	MobiDBLite	consensus disorder prediction	649	666	-	-
	Dod01g0408	712	SUPERFAMILY	SpoIIaa-like	519	641	IPR036513	-
	Dod01g0408	712	PANTHER	SULFATE TRANSPORTER	50	675	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
	Dod01g0408	712	Pfam	Sulfate permease family	94	467	IPR011547	GO:0016021
	Dod01g0408	712	ProSiteProfiles	STAS domain profile.	517	641	IPR002645	-
	Dod01g0408	712	Pfam	STAS domain	518	637	IPR002645	-
	Dod01g0408	712	CDD	STAS_SulP_like_sulfate_transporter	518	634	-	-
	Dod01g0408	712	MobiDBLite	consensus disorder prediction	698	712	-	-
	Dod01g0408	712	ProSitePatterns	SLC26A transporters signature.	123	144	IPR018045	GO:0008271\|GO:0008272
	Dod01g0408	712	MobiDBLite	consensus disorder prediction	649	712	-	-
	Dod01g0408	712	MobiDBLite	consensus disorder prediction	681	697	-	-
	Dod01g0408	712	Gene3D	STAS domain	497	645	IPR036513	-
	Dod01g0408	712	PANTHER	SULFATE TRANSPORTER 4.1-RELATED	50	675	-	-
	Dod01g0408	712	TIGRFAM	sulP: sulfate permease	80	637	IPR001902	GO:0015301\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g0408	Dod-Chr1	7031663	7039493	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod01g0408	32	672	Inorganic Solute Cotransporters	AT5G13550	74.339	0.0	963

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g0408	K18059		-	gmx:100794754	1166.37