Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0405 ATGGAGTCTACACACCAAACACCAAGCGTAATTTTGAAATTGATGGGTCTTAACAAAGTGCCTCCCGAACATCCTATTCAAGATAAACCGAAAGTGCTCTCAGATGAATACTTCCAGAAAGTTGCCTCTATTGGTGTCAGAAAGAAGCGTTCGTCTCGCCAGCATCATTCATTTGGAATGAGTACTGATGAAAAGGAAGAATCTGAGGATGTTTTAAAGGTGTTCAAAACAATAAGGAGAAATAAGCACCATACCCCAGGAGACAGGAAAGAAAATCTATACTTGTCTGAAGCAAAGGTAAAAGGCTTGCCACAACAGGTCGTGGATGCTTCATACAAATCTGGAAACAGGAAGCCTGAAACATTAGTTGATGCTGTTAGTTCCTTCGATCATGAAAGAAGTGTGAATTTAGGGAGGACAGCTGAGCAAGGACATCTGCAATTGCGACAGAAAACGAATATCAGGTTGCAGAAAGGTGTTCATGGACATGAAGAAGCTGGATTGTATGAATCATTTAGGTTTTCAAAATCTCAATTGGATCTCAAGGATGAAACTTTCAATTCAAGAATTGCTGTTTTGAAGGCAAATCCTGGAAAAGGGGGAAACGGAATAAATTATGTTTCTATGCAAACTGGGACTGCTGCAAAAGGAGTTTTAGACTCTGTTTCAAGTTCATTTTCGGGAGGGAATCAAGCATTTGCTCAAAGTTCTGATATGCTGAAGCCTGATTCAAATGTTGCAGTTAACGAGATCCAAGGCAATTCCCTTTTCTTCTGTTCTGGTGGTGCTTATGTAGGTTCAGAAGCTAAGAACAAAACCTTGAAACAGTTGGATGTTACTGAAAAATTGCAAGCAGTTGAAAGACATGATCAAGGCAGTACCCATCTTCAGTTGCTTACTGTTTCTGAACACAGCTATTATACAGCAAGAAATATTAATAATCGAAGTCATTTTAGCAATGATAATATTAAAATGAACACTATATGGAAGGTTGATGTAAAGTATAGTCGTGCCAGAAAAGTGGCAATGACTAGACCTTTTCATACATCTTCTGTTATTGCATGTAATCGCAGATCCATGGATAAAGATAACCTTTTTGCGAAATATTGGGGTTTGAGGAAGAATGCATCAGCAAATTGGTCAACCCAGAAGTCAAAGAATCAAAGCATCAACCAGGAAGACTGTTCGGAAGATATGAACCTTAGGTCCAGCATTGAGAAATCCCCATCTTCTTCCTCTTATTTCAGTAATAATCATGTTGAAGAGAATAGTGTTGACCTGCAAAAGTTGAAGAATGACGGTGATTTGTCTGGTAAGAAACCTATGCTTCTCGAATTGTCAAGGTCTGGATCTTCTACCTCCTTAGACAATCAGATCTTGCAAGAGACATGCTTTATCAATGATGAAGTGAAGAATGAGCATGAAGATCACAATATGAATATTGTATCTCCTAATTCATCAATTAATTGCTTGAAGTCTGAAGCAGAGGTCGAGTTTGTTAGCAGGTCACATAATAATGCAACCATGCAGCAGTCAGAATCAGCAGCTTCTGTTTGGTCACAGGGAGACAGTGATTCTTTGAGTCGAAGTTCATATGCTTCAACGCAACAGGATGCATCAGAATTTCAAGAAGATTCTGCATGTTCACTTTTCTCTGGGACTGAGCCAGATTCTCTTGGTAGCTTTGATGATGCATATGAACCAAGTCCAGTTTCAGTTCTAAAACCTTCGTTTAGAGAAAATATTTCATCCAGCTTGAAGGTTGTTGGTGCTGATGAATATGACTTCTCTGAAGTTGATGATGAAGAATTTGGTTTGAATGTTTCAAGTGATGAAGATTGCGAGGACAAATCTGTTGGTGGATATGAAGAAAAGAAAGATTTAATGGGATCATTTAGATCCGAAGAAAGTAGGGATTTCTCCTATGTTGTCGAGGTCTTAAACGAGGCAGGTATTTCTAATAGGAGCTTGTTTACAGACTTCTCTACGTGGCACTCTGCCGAATGCCCTATTAGCCCTTCTGTCTTTGAAGTCCTGGAAAAGAAATTCGGTGAGCAGCAACTCTGGAAGAGATCTGAAAGGCGGCTTCTCTTTGACCGCATTAATGTAGGGCTGTTGGAGATTCTCCAGCCATGTTCATATGTCCCCACATGGGAAAAGCCTGTGTCAAGAAGGTTGAATGCTGAACTAAGCCAGGACATGATTGAAGAAGAGATGTGGGGGTTGCTTGTGGCCCAAGAGAAGAAATCCAATAAGGATTCAGCAGACAATATGCTTGGGGGGAAAATTAGCTGGATAGAACTAGGTGAAAATATTGAAGATATTGTTAGAGAGATAGTTAAGTTATTAATAGAGGAGCTTGCAAATGAGATACTAAGCTTGGAGAATTTTTTAGATATGTAG 2403 0.3945 MESTHQTPSVILKLMGLNKVPPEHPIQDKPKVLSDEYFQKVASIGVRKKRSSRQHHSFGMSTDEKEESEDVLKVFKTIRRNKHHTPGDRKENLYLSEAKVKGLPQQVVDASYKSGNRKPETLVDAVSSFDHERSVNLGRTAEQGHLQLRQKTNIRLQKGVHGHEEAGLYESFRFSKSQLDLKDETFNSRIAVLKANPGKGGNGINYVSMQTGTAAKGVLDSVSSSFSGGNQAFAQSSDMLKPDSNVAVNEIQGNSLFFCSGGAYVGSEAKNKTLKQLDVTEKLQAVERHDQGSTHLQLLTVSEHSYYTARNINNRSHFSNDNIKMNTIWKVDVKYSRARKVAMTRPFHTSSVIACNRRSMDKDNLFAKYWGLRKNASANWSTQKSKNQSINQEDCSEDMNLRSSIEKSPSSSSYFSNNHVEENSVDLQKLKNDGDLSGKKPMLLELSRSGSSTSLDNQILQETCFINDEVKNEHEDHNMNIVSPNSSINCLKSEAEVEFVSRSHNNATMQQSESAASVWSQGDSDSLSRSSYASTQQDASEFQEDSACSLFSGTEPDSLGSFDDAYEPSPVSVLKPSFRENISSSLKVVGADEYDFSEVDDEEFGLNVSSDEDCEDKSVGGYEEKKDLMGSFRSEESRDFSYVVEVLNEAGISNRSLFTDFSTWHSAECPISPSVFEVLEKKFGEQQLWKRSERRLLFDRINVGLLEILQPCSYVPTWEKPVSRRLNAELSQDMIEEEMWGLLVAQEKKSNKDSADNMLGGKISWIELGENIEDIVREIVKLLIEELANEILSLENFLDM* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0405 800 PANTHER AFADIN 1 797 - -
Dod01g0405 800 PANTHER DUF4378 DOMAIN PROTEIN 1 797 - -
Dod01g0405 800 MobiDBLite consensus disorder prediction 506 545 - -
Dod01g0405 800 Pfam Domain of unknown function (DUF4378) 639 790 IPR025486 -
Dod01g0405 800 MobiDBLite consensus disorder prediction 381 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0405 Dod-Chr1 6941908 6947236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0405 556 794 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 34.109 7.08e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0405 - - lang:109354222 772.696