Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0377 ATGACAAGTTTTCACCTTCAGTGGAGAGTCTTAAGTTTGCTGATTGCAGCTTCCTACTTGCTGACATGCTTTGGAGACAATGACATGCATGTGCAGTTGAATGATGATGTTCTTGGCCTGATTGTGTTTAAATCAGACCTTCATGACCCTTCTTCTTACCTTACTTCATGGAATGAAGATGATGCCAGCCCTTGTTCATGGCAGTTTGTGCAGTGCAACCCTTTGACCAGAAGAGTCTCTGAGGTCTCACTTGATGGCTTAGGATTATCTGGGAAGATTGGAAGAGGCCTTGAGAAGTTGCAGCATCTAACGGTATTGTCCCTTTCTCATAACAACTTGAGTGGGAGTCTTAGTCCAGCACTCACACTTTCTAGCACCCTTGAGAGGCTAAATCTTAGTCACAATGGCCTTTCTGGTCCAATTCCAACTTCTTTTGTGAATATGAGTTCAATAAGGTTCCTTGATCTTTCTGAGAATTCATTCTCAGGACCAATCCCTGACAACTTGTTTGATAACTACTTTTCCCTTCATTACCTTTCTTTAGCTAGGAATAGTTTTGAGGGGCAAATTCCTAGTACACTGTCTAGGTGTTCCTCATTGAATAGCCTTGATCTTTCCAATAACCGTTTTGCCGGTTATGTGGACTTCACTGGGATTTGGTCATTGGACAGGCTTAGGAATTTGGATCTATCTAACAATGACTTATCTGGGTCCTTACCTAGGGGAGTTTCAGCCATACATAACTTGAAAGAGATCATATTGAAGGGTAATCAGTTTTCAGGTCCATTACCTAGTGATATTGGACTCTGCCCGCATTTGAATAGGTTGGATTTTAGTGATAATCAGTTCAGTGGAGAACTACCAGAGTCATTGGGGAAGCTGAACTCTTTGAGCTATTTCAGTGCATCGAATAATGTTTTCACCAGTGAATTTCCTCAATGGATTGGTAACATGACCAGTCTTGAATACCTGGAGCTCTCAAACAATCAGCTCACTGGAAGCATTCCAGATTCAATTGGAGAACTGAGATCACTTAATTATCTGAGCATTGCCAATAACAAGGTTGTTGGAAACATTCCATCGTCATTGGTTTCCTGCACAATGTTATCAGTGATCAAGCTCAATGGAAATGGCTTCAATGGCAGCATACCAGAGGGCTTGTTTGGCCTTGGATTACAGGAAATAGACTTTTCCCATAATCAGTTGACAGGTTCAATCCCAGCTGGCTCAAGCAGGCTCTTGGAAAATCTCATCAATTTGAATCTTTCAGAGAACCACCTCCAAGGACAAATCCCTGCAGAAATGGGGCTTCTTTCGAAAATAAGATACTTGAACTTATCATGGAATGATCTTCATTCACAGATGCCTCCAGAATTTGGTCTCCTTCAGAATCTGACAGTGTTAGATCTTCGGAACAGCGCCTTGTATGGTTCGATTCCAGCTGATATATGTGATTCTGGCAATTTGGCTGTCGTTCAACTGGATGGAAATTCATTGAAGGGGACCATTCCAGAGGAGATGGGGAATTGTTCATCTCTTTACTTGCTGAGTTTGTCTCACAATAATTTGAGTGGTTCAATCCCAAAGTCCATGTCAACGCTAAGCAAGCTGAAGATCCTCAAATTGGAATTCAATGAACTGAGTGGAGAGATACCAATGGAGCTTGGGATGCTCCAAAATCTTCTTGCTGTGAACATATCATACAACAGGCTGACAGGCAGGCTTCCAACTGGAAGCATATTTCAGAACTTAGACAAAAGTTCATTGGAAGGAAACCTTGGTCTTTGCTCACCCTTGCTTAAAGGTCCATGTAAGATGAATGTGCCAAAGCCACTAGTGCTTGACCCAAATGCCTATGACAACCAAATAGGCTCTCCAAGGGAAAGCAATGAATCATCTGAGCCTAGCCAAATTCATCACCGCAGGTTCCTTAGTGTTTCTGCTATTGTAGCAATTTCAGCATCATTTGTCATCCTATTGGGAGTGATTGCCATTAGCCTACTCAATGTTTCTGTGAGGAGAAGGCTAAAATTTGTGGACAATGCCTTGGAAAGCATGTGCTCAAGCTCATCCAGATCAGGATCTCCAGCAACAGGAAAGCTTATTCTGTTTGATTCCCAATCCTCACCTGATTGGATCAGCAATCCAGTATCCTTGCTCAACAAGGCATCAGAGATTGGAGAAGGGGTCTTTGGAACTGTCTACAAGGTTCCATTGGGATCAAATGGCAGCATGGTAGCAATCAAAAAACTCATCACCTCAAACATAATCCAATATCCAGAAGACTTTGATAGGGAAGTTAGAATCCTAGGAAAAGCAAGGCACCAAAATCTGATATCACTCATAGGGTACTATTGGACTCCTCAACTACAGCTCCTAGTGACTGAGTATGCACCAAATGGTAGCCTCCAAGCCAAGCTACATGAGAGGCTCCCTTCAAGCCCTCCACTTTCATGGGCTAACAGGTTCAAGATTTTGCTTGGAACAGCAAAGGGTCTTGCACATTTGCACCATTCATTCCGGCCTCCGATCATTCACTACAACATAAAGCCAAGCAACATTCTCCTTGATGAAAACCACAACCCCAAGATCTCAGATTTTGGATTGGCAAGGCTTCTAACAAAGCTTGACAGGCATGTCATGAACAACAGGTTCCAAAGTGCATTAGGCTATGTGGCACCAGAATTAGCATGCCAGAGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGTTTTGGTGTGATGATACTTGAGCTTGTGACAGGTAGAAGGCCAGTGGAGTATGGTGAGGACAACGTGCTGATTCTGAATGATCATGTGAGGATGCTGCTTGAACAAGGGAATGTGTTGGAATGTGTTGATCCATGCATGAGTGATCAGTATCCAGAAGATGAGGTTTTGCCAGTGCTGAAGCTTGCAATGGTGTGCACATCTCAGATACCTTCTAGCAGGCCTTCTATGGCTGAAGTGGTGCAAATACTTCAGGTCATTAAGACCCCAGTTCCTCAAAGGATGGAAGTGTTTTGA 3027 0.4298 MTSFHLQWRVLSLLIAASYLLTCFGDNDMHVQLNDDVLGLIVFKSDLHDPSSYLTSWNEDDASPCSWQFVQCNPLTRRVSEVSLDGLGLSGKIGRGLEKLQHLTVLSLSHNNLSGSLSPALTLSSTLERLNLSHNGLSGPIPTSFVNMSSIRFLDLSENSFSGPIPDNLFDNYFSLHYLSLARNSFEGQIPSTLSRCSSLNSLDLSNNRFAGYVDFTGIWSLDRLRNLDLSNNDLSGSLPRGVSAIHNLKEIILKGNQFSGPLPSDIGLCPHLNRLDFSDNQFSGELPESLGKLNSLSYFSASNNVFTSEFPQWIGNMTSLEYLELSNNQLTGSIPDSIGELRSLNYLSIANNKVVGNIPSSLVSCTMLSVIKLNGNGFNGSIPEGLFGLGLQEIDFSHNQLTGSIPAGSSRLLENLINLNLSENHLQGQIPAEMGLLSKIRYLNLSWNDLHSQMPPEFGLLQNLTVLDLRNSALYGSIPADICDSGNLAVVQLDGNSLKGTIPEEMGNCSSLYLLSLSHNNLSGSIPKSMSTLSKLKILKLEFNELSGEIPMELGMLQNLLAVNISYNRLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYDNQIGSPRESNESSEPSQIHHRRFLSVSAIVAISASFVILLGVIAISLLNVSVRRRLKFVDNALESMCSSSSRSGSPATGKLILFDSQSSPDWISNPVSLLNKASEIGEGVFGTVYKVPLGSNGSMVAIKKLITSNIIQYPEDFDREVRILGKARHQNLISLIGYYWTPQLQLLVTEYAPNGSLQAKLHERLPSSPPLSWANRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENHNPKISDFGLARLLTKLDRHVMNNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRMLLEQGNVLECVDPCMSDQYPEDEVLPVLKLAMVCTSQIPSSRPSMAEVVQILQVIKTPVPQRMEVF* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0377 1008 ProSiteProfiles Leucine-rich repeat profile. 320 342 IPR001611 GO:0005515
Dod01g0377 1008 Pfam Protein kinase domain 722 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0377 1008 SUPERFAMILY Protein kinase-like (PK-like) 723 996 IPR011009 -
Dod01g0377 1008 Gene3D Ribonuclease Inhibitor 32 171 IPR032675 -
Dod01g0377 1008 Gene3D Transferase(Phosphotransferase) domain 1 802 1005 - -
Dod01g0377 1008 ProSitePatterns Protein kinases ATP-binding region signature. 726 750 IPR017441 GO:0005524
Dod01g0377 1008 ProSiteProfiles Protein kinase domain profile. 720 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0377 1008 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Dod01g0377 1008 CDD STKc_IRAK 726 995 - -
Dod01g0377 1008 Gene3D Ribonuclease Inhibitor 269 343 IPR032675 -
Dod01g0377 1008 SMART LRR_typ_2 318 342 IPR003591 -
Dod01g0377 1008 SMART LRR_typ_2 100 124 IPR003591 -
Dod01g0377 1008 SMART LRR_typ_2 558 583 IPR003591 -
Dod01g0377 1008 SMART LRR_typ_2 222 246 IPR003591 -
Dod01g0377 1008 SMART LRR_typ_2 438 461 IPR003591 -
Dod01g0377 1008 SMART LRR_typ_2 462 486 IPR003591 -
Dod01g0377 1008 SMART LRR_typ_2 148 172 IPR003591 -
Dod01g0377 1008 Pfam Leucine rich repeat 304 354 IPR001611 GO:0005515
Dod01g0377 1008 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Dod01g0377 1008 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Dod01g0377 1008 SUPERFAMILY L domain-like 317 589 - -
Dod01g0377 1008 PRINTS Leucine-rich repeat signature 225 238 - -
Dod01g0377 1008 PRINTS Leucine-rich repeat signature 318 331 - -
Dod01g0377 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 1006 - -
Dod01g0377 1008 Gene3D Phosphorylase Kinase; domain 1 720 801 - -
Dod01g0377 1008 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Dod01g0377 1008 PANTHER BNAA09G02190D PROTEIN 9 1006 - -
Dod01g0377 1008 Gene3D Ribonuclease Inhibitor 172 266 IPR032675 -
Dod01g0377 1008 SUPERFAMILY L domain-like 49 387 - -
Dod01g0377 1008 Gene3D Ribonuclease Inhibitor 344 610 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0377 Dod-Chr1 6539480 6542871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0377 25 1005 Receptor kinase-like Gene Family AT3G28040 65.893 0.0 1273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dod01g0377 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0377 - - gmx:100795810 1646.71