Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0368 ATGACTCAGGCTGTGGAGGTTCTGAATAGATATGGGACGGATCTGGTAGGGGAAGCTCGGGGTTCTGATTCTGAGTGTTTGGCTGGTTTTGAGTGTTTCTTCAACATTGTGAGGGCGCTGGGGATGGGATCGTGCATCTCGGAGGCTGGTGGTCGCTCCCCTCCCCTCCTCCCTTACAATTCTGACTCTAATTTGGATGGTGGGAAGAGGAGGAGGCTGAAGGGTTCCTCTTCCTTTGATTTCAAAGTGCCTGGGAGGATGTTCCTGAATGGGTCCAGCGAGGTTGCATCCTTGTACTGCAAGCAAGGTAGAAAGGGTATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTGGTTCAAAGGAGGACACCATTTTTTGTGGTGTATTTGATGGTCATGGACCTTATGGCCATAGGGTTGCGAAGAAAGTCAGGGATTCTTTTCCTTTAAAGCTTATTGCTCAATGGGATTTGCACCGTAAGAATAAAGATGGACTGAGTGATCACAGCAGTGCTGCAGGAAGTTATAATTCTGAGGAGATTGGATTTAGACAGGTTGATGAGAAACCTAGTGTGACTGATCATGAGCCTGATGGAACAGATACTATTTTGGCCCTAAAAGAATCTTTGCTGAAGGCTTGTAAGATTATGGACAAAGAACTGAAACTGCATCCTGATATTGACTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGGTCAAGCAGGGGCAGGACCTTGTTATTGGTAATGTTGGGGACTCGAGAGCTGTGTTGGGTACCCGAGATCATGATGATTCTCTTGTTGCTGTTCAATTGACAATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATTACGCTTCGTAAAGGAAGGGTCTTTTCCCTTCAGAATGAACCAGATGTTGCTCGAGTTTGGCTGCCTACCTCTGATTTCCCTGGTCTTGCTATGGCACGGGCTTTTGGAGATTTTTGCCTGAAGGACTTTGGATTGATCTCTGTTCCAGATGTCTCATATCACCGCCTTACTAACAAGGATGAATTTGTTGTATTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGACATTGTGGCATCTGCTCCACACTCTTCAGCAGCTCGATCACTGGTTGAGTCAGCCGTCAAAGCATGGAGGACGAAATTCCCATTTTGCAAGATCGATGATTGTGCTGTGGTTTGCCTCTTCTTTGATTCAAATTCAGACTCGAGTTCAGCATCTACCTCGGAAGAGTTGATACCAGGGTCATCAGTTGACCAATCTGAGCAGTCATCTCTGCTTGGTGAGAAGGGAATTGGAGTGGAAGCTGAAAAACAGCAGCAATAG 1362 0.4589 MTQAVEVLNRYGTDLVGEARGSDSECLAGFECFFNIVRALGMGSCISEAGGRSPPLLPYNSDSNLDGGKRRRLKGSSSFDFKVPGRMFLNGSSEVASLYCKQGRKGINQDAMLVWENFGSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLIAQWDLHRKNKDGLSDHSSAAGSYNSEEIGFRQVDEKPSVTDHEPDGTDTILALKESLLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDHDDSLVAVQLTIDLKPNLPREEERITLRKGRVFSLQNEPDVARVWLPTSDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTNKDEFVVLATDGIWDVLSNEEVVDIVASAPHSSAARSLVESAVKAWRTKFPFCKIDDCAVVCLFFDSNSDSSSASTSEELIPGSSVDQSEQSSLLGEKGIGVEAEKQQQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0368 453 CDD PP2Cc 95 409 IPR001932 -
Dod01g0368 453 Gene3D - 91 411 IPR036457 -
Dod01g0368 453 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 416 - -
Dod01g0368 453 PANTHER ALPHABET, ISOFORM E-RELATED 42 416 - -
Dod01g0368 453 Pfam Protein phosphatase 2C 172 386 IPR001932 -
Dod01g0368 453 SUPERFAMILY PP2C-like 93 411 IPR036457 -
Dod01g0368 453 SMART PP2C_4 89 407 IPR001932 -
Dod01g0368 453 MobiDBLite consensus disorder prediction 414 453 - -
Dod01g0368 453 MobiDBLite consensus disorder prediction 414 439 - -
Dod01g0368 453 ProSiteProfiles PPM-type phosphatase domain profile. 95 409 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0368 Dod-Chr1 6459329 6468163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0368 82 422 PP2C-type Phosphatase Gene Family AT1G16220 59.599 2.87e-148 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0368 - - gmx:100802479 783.482