Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0365 ATGGCATTACTCCCACAACCCCAGGAACAAGAACCCGAAAAACCCGAAGAAATCACCGTCGCTGCTGCGGCTACAACAACAACAACAACAACAGAAGAGGACACAACCATCGACGTGCACACCACGAGGGGTGCTCCCATACGCTACCTCCCTCTGGATCACCTCTACTCCGCCACCTCACCTTGTAGCGGCTCCTCCAACGTCATGTCCAAAAAAGTTAAAGCCTCCCGCAAGCTCCCTCATCACTTCCCTAACCAAAACGACGACGTCGTTCTCCTTAACAGCAACACCAAAACGACGACGACGATGAATACTGCTGCTGCTGCTGCTACTAATCATGTTGTTCCTTTTTCCAATAGCAATAAGCCGCCGGTTATTTTTGTGTACTCTCGGAGGAGGAAGAGGGGTGGTGGTGGTGGTTGTTGCAATTCTAATGCGACGTCGTTTTACGATTCGGTTTCGGGTCGGGTTGGGAAGGACCCGAAGAAGAAGAGGAGGAGGATTGGGAGCACTGAATTGGAGAAATTGGGGGTGGATTTGAGGGCATTGGGGGGTTTTGAAGGGCCGAGGTTGAGGGAATGCCGCAATAGCAATAATAATAATAATAATAATTATAATAATCACGTTGATGGGAAGAGGATTAATGGTGTTGGTGTTGGTGGTGGTTCGTTGGAGAAGTTCCCCAAGTTGGTATCTGAATCTCGAACTGTGAAGAGATGGGTCGGGTTGAGTTTTGACAATGTTGACCCTGAGGTGTTCGTTGGATTACGGTGCAAGGTGTATTGGCCGATGGATGTAAAATGGTACTCTGGTTATGTCAAAGGTTATGATATGGAAATGAAGATACACCATGTTAAGTATGACGATGGTGAAGACGAAAATTTGATCCTTTCAAAGGAAAATGTAAAATTCCATGTTTCCCGTGAGGAGATGAAGCGTTTAAAATTGAGTTATGCCAAAGTTCATGACAGTAATGTCTCTGAATATGATGTCGAAGAGATGCTTGCCATGGCTGCAAGTTTGGATGGTTGTCAAAACTTTGAACCTGGAGATATCATATGGGCCAAGCTAACAGGTCATGCAATGTGGCCAGCTGTTGTTCTGGATGAATCACTTGCCAGCAAGTGTAAGGGTCTGAAGACGCTTTTAGGAGGAAGTTCAGTTCCTGTCCAGTTTTTTGGCACCCATGACTTTGCAAGGGTTAGACTGCAGCAGGTGAAATCATTTCTGAGTGGACTTCTTACCGAACTACACACAAAGTGCAAGAAAATTAGTTTTATGGAAGGGATGGAAGAGGCAAAAAGGTATTTGAATGAACTGAAACTTCCTTCAGAGATGCTAGAGTTGCAGAGAGGATGTACAGCTGATGACTGTAACAATGTAACTGGAGAGGATGGAGGATGTACAGATTCAGGTGAAGATTGTTCAAGTGACAAAGAGTTGACAGCACTGGCAAACATTGAATCTTTTCCTTATGAAGTAGAAGACTTAACAATTATATGCCTAGGAAGAATAGTTGAAGATTCTGCATCTTTCCGAGATGGAAGATCCATCTGGCCCGAAGGGTACACAGCAGTGAGGAAGTTTACTTCGGTCACTGACCCTAAAGTATCTGCTGAGTATAAGATGGAGGTCCTGAGAGATCCAGAATCCAAAGTACGACCTCTATTTAGAGTGACAGTTGATGGTGGTGATCAGTTCAATGGTTATACACCATCAGCTTGTTGGGACCAAATATACAAAAAGATAAATAAAATGGAAAGGGATGCTTCTGAAGTTTCTGTTGCAGAAAGTGGGGTGGAAATGGGCTATGAATCTGGGTCAGATATGTTTGGTTTCTCCAATCCTAAAGTGGCTAAACTTATAAAGGGATTATCTAAATCCAAAGTTTCTTCCAAGAACTCAAGTTGCAAGCTAGGTTCCAGAGGTTATAATGACCTGCCTGTTGGTTATAGGCAAGTTCATATTAATTGGTTTGATCTCGATAAGTGCAATGTGTGCCATATGGATGAGGAGTACGAGAACAATCTGTTTCTGCAATGTGACAAGTGTAGAATGATGGTCCATGCTAGATGCTATGGAGAACTGGAACCTGTAAATGGAGTGCTATGGTTGTGCAACTTGTGTCGTTCGGGTGCTCCTCCCCCACCTTGTTGCCTATGTCCATTAATAGGAGGTGCAATGAAGCCTACAACAGATGGTCGTTGGGCTCATTTGGCTTGTGCTATGTGGATTCCTGAGACCTGCTTAGCTGATGTCAAGAAAATGGAGCCTATTGATGGTTTGAGTAGAATCAGTAAGGACCGCTGGAAGTTATTATGTAGCATATGTGGTGTATCTTATGGTGCCTGCATCCAATGTTCAAACAGTTCTTGCCGAGTAGCATATCATCCACTTTGTGCACGTGCTGCTGGTCTCTGTGTTGAGCTTGAGAATGAGGACAGGCTCTATCTACTCTCTGTTGATGATGATGAAGATCAGTGCATTCGCCTACTTTCATTTTGCAAGAAACATAGGCAGCCATCTAATGAACATTCTGCTGCCAATGAGCGTATCGTTCGAGTTGCTGGTCCATGTTCTGACTATGAACCACCAGCCAACCCATCTGGTTGTGCCCGAAGTGAGCCATATGATTACTTTGGCAGGAGAGGCCGGAAAGAGCCTGAAGTACTTGCAGCTGCATCGTTGAAACGTTTGTTTGTTGAGAACCAACCTTACTTAGTGAGTGGATACTGCCAGCATGGTTTGCCAAATGATCCAGAGCCTTCTGGCAGAGGAGTCTGTTCCCAAGTACAAAGGCTGAGACACTCTTTGGATGACACTTCAGACGACATACTTTCCATTGCCGAGAAATATAAGCACATGAGGAAAACCTTTCGGAAACAGCTAGCGTTTGGGAAATCAAGAATTCATGGATTTGGCATCTTTGCAAAGTATCCATATAAAGGTGGAGACATGGTGATTGAATATACTGGTGAACTTGTTAGACCTCCTGTAGCTGATCGCAGAGAGCACTTTATATACAATTCCTTGGTGGGTGCTGGAACATATATGTTTCGGATTGATGATGAAAGAGTCATTGATGCCACTAGAGCAGGAAGCATTGCTCATCTAATTAATCATTCTTGTGCACCAAATTGCTATTCAAGAGTTATTAGTGTCAACGGGGATGAGCACATTATAATATTTGCAAAGAGGGACATTAAACAATGGGAAGAGCTTACATATGATTATAGATTTTTCTCAATTGATGAACGGCTTGCTTGTTACTGTGGCTTCCCAAAATGCCGAGGTATAGTAAATGATACCGAGGCAGAAGAGCGAGCTGCTACATTGTATGCACCTCGAAGCGATTTGGTAGATTGGAGAGGAGAATGA 3378 0.4393 MALLPQPQEQEPEKPEEITVAAAATTTTTTTEEDTTIDVHTTRGAPIRYLPLDHLYSATSPCSGSSNVMSKKVKASRKLPHHFPNQNDDVVLLNSNTKTTTTMNTAAAAATNHVVPFSNSNKPPVIFVYSRRRKRGGGGGCCNSNATSFYDSVSGRVGKDPKKKRRRIGSTELEKLGVDLRALGGFEGPRLRECRNSNNNNNNNYNNHVDGKRINGVGVGGGSLEKFPKLVSESRTVKRWVGLSFDNVDPEVFVGLRCKVYWPMDVKWYSGYVKGYDMEMKIHHVKYDDGEDENLILSKENVKFHVSREEMKRLKLSYAKVHDSNVSEYDVEEMLAMAASLDGCQNFEPGDIIWAKLTGHAMWPAVVLDESLASKCKGLKTLLGGSSVPVQFFGTHDFARVRLQQVKSFLSGLLTELHTKCKKISFMEGMEEAKRYLNELKLPSEMLELQRGCTADDCNNVTGEDGGCTDSGEDCSSDKELTALANIESFPYEVEDLTIICLGRIVEDSASFRDGRSIWPEGYTAVRKFTSVTDPKVSAEYKMEVLRDPESKVRPLFRVTVDGGDQFNGYTPSACWDQIYKKINKMERDASEVSVAESGVEMGYESGSDMFGFSNPKVAKLIKGLSKSKVSSKNSSCKLGSRGYNDLPVGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKKMEPIDGLSRISKDRWKLLCSICGVSYGACIQCSNSSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKKHRQPSNEHSAANERIVRVAGPCSDYEPPANPSGCARSEPYDYFGRRGRKEPEVLAAASLKRLFVENQPYLVSGYCQHGLPNDPEPSGRGVCSQVQRLRHSLDDTSDDILSIAEKYKHMRKTFRKQLAFGKSRIHGFGIFAKYPYKGGDMVIEYTGELVRPPVADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLACYCGFPKCRGIVNDTEAEERAATLYAPRSDLVDWRGE* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0365 1125 CDD ePHD_ATX1_2_like 724 838 IPR041956 -
Dod01g0365 1125 SMART set_7 961 1085 IPR001214 GO:0005515
Dod01g0365 1125 Pfam SET domain 972 1078 IPR001214 GO:0005515
Dod01g0365 1125 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX2 29 1122 - -
Dod01g0365 1125 Gene3D - 490 630 - -
Dod01g0365 1125 ProSiteProfiles PWWP domain profile. 349 412 IPR000313 -
Dod01g0365 1125 PANTHER PHD FINGER PROTEINS 29 1122 - -
Dod01g0365 1125 ProSiteProfiles SET domain profile. 961 1079 IPR001214 GO:0005515
Dod01g0365 1125 CDD SET_SETD1-like 949 1097 - -
Dod01g0365 1125 Pfam F/Y-rich N-terminus 496 545 IPR003888 GO:0005634
Dod01g0365 1125 SUPERFAMILY Tudor/PWWP/MBT 344 442 - -
Dod01g0365 1125 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 655 709 IPR013083 -
Dod01g0365 1125 ProSiteProfiles FYR domain FYRC motif profile. 552 638 IPR003889 GO:0005634
Dod01g0365 1125 SUPERFAMILY Tudor/PWWP/MBT 252 295 - -
Dod01g0365 1125 SUPERFAMILY SET domain 957 1098 IPR046341 -
Dod01g0365 1125 Pfam F/Y rich C-terminus 554 628 IPR003889 GO:0005634
Dod01g0365 1125 Pfam PHD-zinc-finger like domain 717 838 - -
Dod01g0365 1125 SMART PWWP_4 347 410 IPR000313 -
Dod01g0365 1125 SMART PHD_3 773 839 IPR001965 -
Dod01g0365 1125 SMART PHD_3 663 710 IPR001965 -
Dod01g0365 1125 Pfam PHD-finger 676 710 - -
Dod01g0365 1125 ProSitePatterns Zinc finger PHD-type signature. 664 709 IPR019786 -
Dod01g0365 1125 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 710 841 IPR013083 -
Dod01g0365 1125 Pfam PWWP domain 350 437 IPR000313 -
Dod01g0365 1125 Gene3D - 337 447 - -
Dod01g0365 1125 CDD PHD_ATX1_2_like 663 709 IPR042010 -
Dod01g0365 1125 SMART fyrn_3 504 548 IPR003888 GO:0005634
Dod01g0365 1125 Gene3D - 251 304 - -
Dod01g0365 1125 ProSiteProfiles Extended PHD (ePHD) domain profile. 715 839 IPR034732 -
Dod01g0365 1125 ProSiteProfiles Zinc finger PHD-type profile. 661 712 IPR019787 -
Dod01g0365 1125 ProSiteProfiles FYR domain FYRN motif profile. 489 548 IPR003888 GO:0005634
Dod01g0365 1125 SUPERFAMILY FYVE/PHD zinc finger 656 725 IPR011011 -
Dod01g0365 1125 Gene3D SET domain 936 1113 IPR046341 -
Dod01g0365 1125 ProSiteProfiles Post-SET domain profile. 1085 1101 IPR003616 -
Dod01g0365 1125 SMART fyrc_3 556 650 IPR003889 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0365 Dod-Chr1 6359930 6371470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0365 664 809 C2H2 Transcription Factor Family AT3G14740 39.735 4.31e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod01g0365 zf-HC5HC2H_2 5.1e-33 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0365 - - gmx:100808923 1716.82