Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g0365 | ATGGCATTACTCCCACAACCCCAGGAACAAGAACCCGAAAAACCCGAAGAAATCACCGTCGCTGCTGCGGCTACAACAACAACAACAACAACAGAAGAGGACACAACCATCGACGTGCACACCACGAGGGGTGCTCCCATACGCTACCTCCCTCTGGATCACCTCTACTCCGCCACCTCACCTTGTAGCGGCTCCTCCAACGTCATGTCCAAAAAAGTTAAAGCCTCCCGCAAGCTCCCTCATCACTTCCCTAACCAAAACGACGACGTCGTTCTCCTTAACAGCAACACCAAAACGACGACGACGATGAATACTGCTGCTGCTGCTGCTACTAATCATGTTGTTCCTTTTTCCAATAGCAATAAGCCGCCGGTTATTTTTGTGTACTCTCGGAGGAGGAAGAGGGGTGGTGGTGGTGGTTGTTGCAATTCTAATGCGACGTCGTTTTACGATTCGGTTTCGGGTCGGGTTGGGAAGGACCCGAAGAAGAAGAGGAGGAGGATTGGGAGCACTGAATTGGAGAAATTGGGGGTGGATTTGAGGGCATTGGGGGGTTTTGAAGGGCCGAGGTTGAGGGAATGCCGCAATAGCAATAATAATAATAATAATAATTATAATAATCACGTTGATGGGAAGAGGATTAATGGTGTTGGTGTTGGTGGTGGTTCGTTGGAGAAGTTCCCCAAGTTGGTATCTGAATCTCGAACTGTGAAGAGATGGGTCGGGTTGAGTTTTGACAATGTTGACCCTGAGGTGTTCGTTGGATTACGGTGCAAGGTGTATTGGCCGATGGATGTAAAATGGTACTCTGGTTATGTCAAAGGTTATGATATGGAAATGAAGATACACCATGTTAAGTATGACGATGGTGAAGACGAAAATTTGATCCTTTCAAAGGAAAATGTAAAATTCCATGTTTCCCGTGAGGAGATGAAGCGTTTAAAATTGAGTTATGCCAAAGTTCATGACAGTAATGTCTCTGAATATGATGTCGAAGAGATGCTTGCCATGGCTGCAAGTTTGGATGGTTGTCAAAACTTTGAACCTGGAGATATCATATGGGCCAAGCTAACAGGTCATGCAATGTGGCCAGCTGTTGTTCTGGATGAATCACTTGCCAGCAAGTGTAAGGGTCTGAAGACGCTTTTAGGAGGAAGTTCAGTTCCTGTCCAGTTTTTTGGCACCCATGACTTTGCAAGGGTTAGACTGCAGCAGGTGAAATCATTTCTGAGTGGACTTCTTACCGAACTACACACAAAGTGCAAGAAAATTAGTTTTATGGAAGGGATGGAAGAGGCAAAAAGGTATTTGAATGAACTGAAACTTCCTTCAGAGATGCTAGAGTTGCAGAGAGGATGTACAGCTGATGACTGTAACAATGTAACTGGAGAGGATGGAGGATGTACAGATTCAGGTGAAGATTGTTCAAGTGACAAAGAGTTGACAGCACTGGCAAACATTGAATCTTTTCCTTATGAAGTAGAAGACTTAACAATTATATGCCTAGGAAGAATAGTTGAAGATTCTGCATCTTTCCGAGATGGAAGATCCATCTGGCCCGAAGGGTACACAGCAGTGAGGAAGTTTACTTCGGTCACTGACCCTAAAGTATCTGCTGAGTATAAGATGGAGGTCCTGAGAGATCCAGAATCCAAAGTACGACCTCTATTTAGAGTGACAGTTGATGGTGGTGATCAGTTCAATGGTTATACACCATCAGCTTGTTGGGACCAAATATACAAAAAGATAAATAAAATGGAAAGGGATGCTTCTGAAGTTTCTGTTGCAGAAAGTGGGGTGGAAATGGGCTATGAATCTGGGTCAGATATGTTTGGTTTCTCCAATCCTAAAGTGGCTAAACTTATAAAGGGATTATCTAAATCCAAAGTTTCTTCCAAGAACTCAAGTTGCAAGCTAGGTTCCAGAGGTTATAATGACCTGCCTGTTGGTTATAGGCAAGTTCATATTAATTGGTTTGATCTCGATAAGTGCAATGTGTGCCATATGGATGAGGAGTACGAGAACAATCTGTTTCTGCAATGTGACAAGTGTAGAATGATGGTCCATGCTAGATGCTATGGAGAACTGGAACCTGTAAATGGAGTGCTATGGTTGTGCAACTTGTGTCGTTCGGGTGCTCCTCCCCCACCTTGTTGCCTATGTCCATTAATAGGAGGTGCAATGAAGCCTACAACAGATGGTCGTTGGGCTCATTTGGCTTGTGCTATGTGGATTCCTGAGACCTGCTTAGCTGATGTCAAGAAAATGGAGCCTATTGATGGTTTGAGTAGAATCAGTAAGGACCGCTGGAAGTTATTATGTAGCATATGTGGTGTATCTTATGGTGCCTGCATCCAATGTTCAAACAGTTCTTGCCGAGTAGCATATCATCCACTTTGTGCACGTGCTGCTGGTCTCTGTGTTGAGCTTGAGAATGAGGACAGGCTCTATCTACTCTCTGTTGATGATGATGAAGATCAGTGCATTCGCCTACTTTCATTTTGCAAGAAACATAGGCAGCCATCTAATGAACATTCTGCTGCCAATGAGCGTATCGTTCGAGTTGCTGGTCCATGTTCTGACTATGAACCACCAGCCAACCCATCTGGTTGTGCCCGAAGTGAGCCATATGATTACTTTGGCAGGAGAGGCCGGAAAGAGCCTGAAGTACTTGCAGCTGCATCGTTGAAACGTTTGTTTGTTGAGAACCAACCTTACTTAGTGAGTGGATACTGCCAGCATGGTTTGCCAAATGATCCAGAGCCTTCTGGCAGAGGAGTCTGTTCCCAAGTACAAAGGCTGAGACACTCTTTGGATGACACTTCAGACGACATACTTTCCATTGCCGAGAAATATAAGCACATGAGGAAAACCTTTCGGAAACAGCTAGCGTTTGGGAAATCAAGAATTCATGGATTTGGCATCTTTGCAAAGTATCCATATAAAGGTGGAGACATGGTGATTGAATATACTGGTGAACTTGTTAGACCTCCTGTAGCTGATCGCAGAGAGCACTTTATATACAATTCCTTGGTGGGTGCTGGAACATATATGTTTCGGATTGATGATGAAAGAGTCATTGATGCCACTAGAGCAGGAAGCATTGCTCATCTAATTAATCATTCTTGTGCACCAAATTGCTATTCAAGAGTTATTAGTGTCAACGGGGATGAGCACATTATAATATTTGCAAAGAGGGACATTAAACAATGGGAAGAGCTTACATATGATTATAGATTTTTCTCAATTGATGAACGGCTTGCTTGTTACTGTGGCTTCCCAAAATGCCGAGGTATAGTAAATGATACCGAGGCAGAAGAGCGAGCTGCTACATTGTATGCACCTCGAAGCGATTTGGTAGATTGGAGAGGAGAATGA | 3378 | 0.4393 | MALLPQPQEQEPEKPEEITVAAAATTTTTTTEEDTTIDVHTTRGAPIRYLPLDHLYSATSPCSGSSNVMSKKVKASRKLPHHFPNQNDDVVLLNSNTKTTTTMNTAAAAATNHVVPFSNSNKPPVIFVYSRRRKRGGGGGCCNSNATSFYDSVSGRVGKDPKKKRRRIGSTELEKLGVDLRALGGFEGPRLRECRNSNNNNNNNYNNHVDGKRINGVGVGGGSLEKFPKLVSESRTVKRWVGLSFDNVDPEVFVGLRCKVYWPMDVKWYSGYVKGYDMEMKIHHVKYDDGEDENLILSKENVKFHVSREEMKRLKLSYAKVHDSNVSEYDVEEMLAMAASLDGCQNFEPGDIIWAKLTGHAMWPAVVLDESLASKCKGLKTLLGGSSVPVQFFGTHDFARVRLQQVKSFLSGLLTELHTKCKKISFMEGMEEAKRYLNELKLPSEMLELQRGCTADDCNNVTGEDGGCTDSGEDCSSDKELTALANIESFPYEVEDLTIICLGRIVEDSASFRDGRSIWPEGYTAVRKFTSVTDPKVSAEYKMEVLRDPESKVRPLFRVTVDGGDQFNGYTPSACWDQIYKKINKMERDASEVSVAESGVEMGYESGSDMFGFSNPKVAKLIKGLSKSKVSSKNSSCKLGSRGYNDLPVGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKKMEPIDGLSRISKDRWKLLCSICGVSYGACIQCSNSSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKKHRQPSNEHSAANERIVRVAGPCSDYEPPANPSGCARSEPYDYFGRRGRKEPEVLAAASLKRLFVENQPYLVSGYCQHGLPNDPEPSGRGVCSQVQRLRHSLDDTSDDILSIAEKYKHMRKTFRKQLAFGKSRIHGFGIFAKYPYKGGDMVIEYTGELVRPPVADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLACYCGFPKCRGIVNDTEAEERAATLYAPRSDLVDWRGE* | 1126 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g0365 | 1125 | CDD | ePHD_ATX1_2_like | 724 | 838 | IPR041956 | - | |
Dod01g0365 | 1125 | SMART | set_7 | 961 | 1085 | IPR001214 | GO:0005515 | |
Dod01g0365 | 1125 | Pfam | SET domain | 972 | 1078 | IPR001214 | GO:0005515 | |
Dod01g0365 | 1125 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE ATX2 | 29 | 1122 | - | - | |
Dod01g0365 | 1125 | Gene3D | - | 490 | 630 | - | - | |
Dod01g0365 | 1125 | ProSiteProfiles | PWWP domain profile. | 349 | 412 | IPR000313 | - | |
Dod01g0365 | 1125 | PANTHER | PHD FINGER PROTEINS | 29 | 1122 | - | - | |
Dod01g0365 | 1125 | ProSiteProfiles | SET domain profile. | 961 | 1079 | IPR001214 | GO:0005515 | |
Dod01g0365 | 1125 | CDD | SET_SETD1-like | 949 | 1097 | - | - | |
Dod01g0365 | 1125 | Pfam | F/Y-rich N-terminus | 496 | 545 | IPR003888 | GO:0005634 | |
Dod01g0365 | 1125 | SUPERFAMILY | Tudor/PWWP/MBT | 344 | 442 | - | - | |
Dod01g0365 | 1125 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 655 | 709 | IPR013083 | - | |
Dod01g0365 | 1125 | ProSiteProfiles | FYR domain FYRC motif profile. | 552 | 638 | IPR003889 | GO:0005634 | |
Dod01g0365 | 1125 | SUPERFAMILY | Tudor/PWWP/MBT | 252 | 295 | - | - | |
Dod01g0365 | 1125 | SUPERFAMILY | SET domain | 957 | 1098 | IPR046341 | - | |
Dod01g0365 | 1125 | Pfam | F/Y rich C-terminus | 554 | 628 | IPR003889 | GO:0005634 | |
Dod01g0365 | 1125 | Pfam | PHD-zinc-finger like domain | 717 | 838 | - | - | |
Dod01g0365 | 1125 | SMART | PWWP_4 | 347 | 410 | IPR000313 | - | |
Dod01g0365 | 1125 | SMART | PHD_3 | 773 | 839 | IPR001965 | - | |
Dod01g0365 | 1125 | SMART | PHD_3 | 663 | 710 | IPR001965 | - | |
Dod01g0365 | 1125 | Pfam | PHD-finger | 676 | 710 | - | - | |
Dod01g0365 | 1125 | ProSitePatterns | Zinc finger PHD-type signature. | 664 | 709 | IPR019786 | - | |
Dod01g0365 | 1125 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 710 | 841 | IPR013083 | - | |
Dod01g0365 | 1125 | Pfam | PWWP domain | 350 | 437 | IPR000313 | - | |
Dod01g0365 | 1125 | Gene3D | - | 337 | 447 | - | - | |
Dod01g0365 | 1125 | CDD | PHD_ATX1_2_like | 663 | 709 | IPR042010 | - | |
Dod01g0365 | 1125 | SMART | fyrn_3 | 504 | 548 | IPR003888 | GO:0005634 | |
Dod01g0365 | 1125 | Gene3D | - | 251 | 304 | - | - | |
Dod01g0365 | 1125 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 715 | 839 | IPR034732 | - | |
Dod01g0365 | 1125 | ProSiteProfiles | Zinc finger PHD-type profile. | 661 | 712 | IPR019787 | - | |
Dod01g0365 | 1125 | ProSiteProfiles | FYR domain FYRN motif profile. | 489 | 548 | IPR003888 | GO:0005634 | |
Dod01g0365 | 1125 | SUPERFAMILY | FYVE/PHD zinc finger | 656 | 725 | IPR011011 | - | |
Dod01g0365 | 1125 | Gene3D | SET domain | 936 | 1113 | IPR046341 | - | |
Dod01g0365 | 1125 | ProSiteProfiles | Post-SET domain profile. | 1085 | 1101 | IPR003616 | - | |
Dod01g0365 | 1125 | SMART | fyrc_3 | 556 | 650 | IPR003889 | GO:0005634 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g0365 | Dod-Chr1 | 6359930 | 6371470 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g0365 | 664 | 809 | C2H2 Transcription Factor Family | AT3G14740 | 39.735 | 4.31e-27 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Dod01g0365 | zf-HC5HC2H_2 | 5.1e-33 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g0365 | - | - | gmx:100808923 | 1716.82 |